Pseudomonas ogarae SWRI108: HU749_027590
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Entry
HU749_027590 CDS
T07889
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza00260
Glycine, serine and threonine metabolism
pza00460
Cyanoamino acid metabolism
pza00630
Glyoxylate and dicarboxylate metabolism
pza00670
One carbon pool by folate
pza00680
Methane metabolism
pza01100
Metabolic pathways
pza01110
Biosynthesis of secondary metabolites
pza01120
Microbial metabolism in diverse environments
pza01200
Carbon metabolism
pza01230
Biosynthesis of amino acids
pza01240
Biosynthesis of cofactors
pza04981
Folate transport and metabolism
Module
pza_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HU749_027590
09102 Energy metabolism
00680 Methane metabolism
HU749_027590
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HU749_027590
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HU749_027590
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HU749_027590
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HU749_027590
Enzymes [BR:
pza01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HU749_027590
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QXH94524
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Position
complement(6225315..6226568)
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AA seq
417 aa
AA seq
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MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTTTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEAAEPGFKAYQQQVIDNAQAMAG
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCVTLAGWICDILDNLGDADVEANVAQQVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccaaatccaaggctacgatgatgcactgctggcggcgatgaac
gccgaagagcaacgccaggaagatcacatcgagctgatcgcgtcagagaactacaccagc
aagcgcgtgatggaggcccagggcagcggcctgaccaacaagtacgccgaaggttatccg
ggcaagcgctactacggtggctgcgagcacgtcgacaaagtcgaagccctggccatcgag
cgcgccaagcaattgttcggtgccgattacgccaacgtccagccgcattccgggtcttcg
gccaacagcgccgtgtacctggccctgctgcaggccggagacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccaaggtgtcgtcctcgggcaagctctac
aacgcggtgcaatacggcatcgacaccaccaccggcctgatcgactacgacgaagtcgag
cgcctggcggtcgagcacaagccgaagatgatcgttgccggtttctccgcttactccaag
accctggacttcccacgtttccgccagatcgccgacaaggtcggtgccctgttgttcgtc
gacatggcccacgttgccggtctggtcgccgccggtctgtaccctaatccactgccttac
gccgacgtggtcaccaccaccacccacaagaccctgcgcggtccacgtggcggcttgatc
ctggccaaggccaacgaagagatcgagaaaaagctcaacgccgcggtattccccggcgcc
cagggcggcccgttgatgcacgtgatcgccggcaaggcggtgtgcttcaaggaagcggcg
gaacctggcttcaaggcttaccagcagcaagtgatcgataacgcccaggccatggctggc
gtgttcatcaagcgcggctacgatgtagtgtccggtggcaccgataaccacctgttcctg
gtcagcctgatccgtcagggcctgaccggcaaggatgccgatgctgccctgggccgcgcc
cacatcaccgtcaacaagaacgccgtgccgaacgacccgcaatcgccgttcgtgacctcg
ggcctgcgcatcggtaccccggcggtgaccacccgtggcttcaaggtgacccagtgcgtc
acgctggccggctggatctgcgacattctcgacaacctcggcgatgccgatgtcgaggcc
aatgtcgcgcagcaagtggcggccctgtgcgcggacttcccggtttatcgctga
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