Pseudomonas ogarae SWRI108: HU749_028200
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Entry
HU749_028200 CDS
T07889
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pza
Pseudomonas ogarae SWRI108
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pza03021
]
HU749_028200 (rpoH)
Transcription machinery [BR:
pza03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HU749_028200 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QXH94642
LinkDB
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Position
complement(6359409..6360263)
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AA seq
284 aa
AA seq
DB search
MTTSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLEAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWSDNSNTNLHEALEVLDERSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKVSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcttatgctctggtcccgggtgcgaacctggaggcctat
gtgcacacggtgaacagcattccattgctgacccccgagcaggagcgtgaactggccgag
agtctctattatgagcaggatcttgaggcggctcggcagatggtgctcgcccacctgcgt
tttgtcgtacatatcgcccgcagctattccggctacgggctggcccaggccgacctgatc
caggaaggcaacgtcggcctgatgaaggcggtcaagcgtttcaacccggaaatgggcgtg
cgcctggtgtcgtttgcggtgcactggatcaaggcggaaatccacgagttcatcctgcgc
aactggcgcatcgtgaaagtcgcgaccaccaaggcccagcgcaagttgttcttcaacctg
cgcagccagaagaaacgcctggcctggctgaacaacgaagaagtccatcgtgtcgccgaa
agcctgggcgtagagcctcgggaagtgcgcgagatggaaagccgcctgaccggccatgac
atggccttcgacccggccgccgaagcggacgacgacagcgctttccaatcgccggccaac
taccttgaagaccaccggtacgacccggcgcgtcaactggaagacgccgactggagcgac
aactccaacaccaacctgcacgaagccctggaagttctggacgagcgcagccgcgacatc
ctctaccagcgctggctggccgaggaaaaagccacgctgcacgacctggcgcagaagtac
aacgtgtcggccgagcggattcgccagcttgagaagagcgcgatgaacaagctcaaggtg
tcgatcgccgcctga
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