Stutzerimonas zhaodongensis: KQ248_08570
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Entry
KQ248_08570 CDS
T09079
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pzd
Stutzerimonas zhaodongensis
Pathway
pzd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pzd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KQ248_08570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pzd03019
]
KQ248_08570
Enzymes [BR:
pzd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KQ248_08570
Messenger RNA biogenesis [BR:
pzd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KQ248_08570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QWV18685
UniProt:
A0A365PP45
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All DBs
Position
1870903..1872228
Genome browser
AA seq
441 aa
AA seq
DB search
MTFASLGLIDQLLRTLESLEYTQPTPVQAKAIPAVLKGRDLMAAAQTGTGKTAGFALPLL
QRLLHEGPQVASNSVRALVLVPTRELAEQVHESFRSYGQDLPLRTYAVYGGVSINPQMMA
LRKGIDVLVATPGRLLDLYRQNAVKFSQVQALVLDEADRMLDLGFSEELDALFSALPKKR
QTLLFSATFSDPIRQMAQELLRDPLSIEVSPRNAAAKTVKQWLVPVDKKRKSELFLHLLA
EKRWGQVLVFVKTRKGVDQLVDELQAQGISSDAIHGDKPQASRLRALERFKAGEVQVLVA
TDVAARGLDIHDLPQVVNFDLPTVAEDYVHRIGRTGRAGATGEAVSLVAADEVDQLAAIE
TLIQQVLPRHDEPGFVPDHRVPTTQPGGQIIKKPKKPKKPKESAAKGRVHLGNWFDESEK
PNAKPIRKVPSLGGTKPTKKR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcgcctctttgggcctgatcgatcagctgctacgcaccctcgaatcgcttgaa
tacacccagccgacgccggtccaggccaaagcgattccggctgtgctcaagggccgggac
ctgatggccgccgcgcagaccggcaccggcaagaccgcgggtttcgccttgccgctgttg
cagcggctgctgcacgaagggccgcaagtggcgagcaattcggtccgcgcactggtgctg
gtgccgacccgtgagctggccgagcaggtgcatgagagcttcagaagctacggccaggac
ctgccgctgcgcacctatgcggtctacggcggcgtcagcatcaatccgcagatgatggcc
ttgcgcaagggcatcgacgtgttggtcgccacacccgggcggttgctggatctgtatcga
cagaacgcggtgaagttcagccaggtgcaggcgctggtgctggacgaggccgatcggatg
ctcgacctcggcttttccgaagagctggatgcgctgtttagcgcgctgccgaaaaagcgc
caaaccttgctgttttctgcgaccttctccgacccgattcggcagatggcgcaggagctg
ctgcgcgatcccctgtccatcgaggtcagcccgcgcaatgctgcggcgaaaaccgtgaaa
cagtggctggtgccggtggacaagaagcgtaagtccgagttgtttctgcatctgctggca
gaaaagcgctgggggcaggtgctggtgttcgtgaagacgcgcaagggcgtcgaccagctt
gtggatgagttgcaggcgcagggcatcagcagcgacgcgatccacggtgacaagccgcag
gcttcgcgactgcgtgcgttggaacgcttcaaggccggtgaagtgcaggtgctggtagcc
accgatgtggccgcacgtggcctggatatccatgatctgccgcaggtggtcaatttcgat
ctgcctactgttgccgaggactatgtgcaccgtatcggccggacaggccgggcgggcgca
acgggcgaggccgtgtcgctggtcgccgccgatgaggtcgatcagctcgctgccatcgag
acgttgattcagcaagttctgccgcgccacgacgagccgggtttcgtcccggatcatcgg
gtgccgaccacccagccgggcgggcagatcatcaagaaaccgaaaaagccgaagaagcct
aaagagtcggctgccaaaggccgtgttcatctgggcaactggttcgatgagagcgagaag
cccaacgccaagccgatccgcaaggtgccgagcctgggcggaacgaagccgaccaaaaag
cgctga
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