Stutzerimonas zhaodongensis: KQ248_16170
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Entry
KQ248_16170 CDS
T09079
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pzd
Stutzerimonas zhaodongensis
Brite
KEGG Orthology (KO) [BR:
pzd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pzd03000
]
KQ248_16170
Transcription factors [BR:
pzd03000
]
Prokaryotic type
Helix-turn-helix
Other families
KQ248_16170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
AAA_5
AAA_2
AAA
HTH_30
HTH_22
Mg_chelatase
AAA_3
AAA_7
HTH_17
HTH_23
AAA_16
Get5_bdg
nSTAND6
HTH_20
PAS_8
MCM
HTH_7
HTH_psq
nSTAND3
DUF2089
DUF815
Motif
Other DBs
NCBI-ProteinID:
QWV16040
UniProt:
A0A365PS60
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All DBs
Position
3562983..3564854
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AA seq
623 aa
AA seq
DB search
MANPAQPISHQALVKGSWSRCERYGLHPLSIPSFGDPAERDVNALLERQRNLVQTTQREV
LPYYENILSNSSCLILLADSGGQLLESWGDRRFVEPAQQRGFKPGASWMERDTGTNAIGT
ALASGQAVHIQRDEHFLQANRYLSGAASPIYDAQRQLIAVLDVSSDSYLPPSHTLGMVKM
MSQSVENRLILNLFRGDYFQLTFNTGQDNLDSQWAGLLVFDESGLIVSANRRADNLLGLA
LTRSRIDRLFDVPLRQLLSQPEDQPLLLRTAGNHRFHGLVRRPQKPRIQARDFRTPDSRP
EHIIDLASIDQGDPQVHKVIRQAQLMLEKDIPILVNGETGVGKEVLVKALHAASSRANAP
LIAVNCAAIPCELIESELFGYEKGAFTGAHQKGSLGLIRKADGGVLFLDEIGDMPLSLQA
RLLRVLQERSVQPLGGGEPYSVDFRLICATNRSLRQEVEKGRFRQDLFYRVSGLGVELPP
LRARYDKYALFQRVWEQHREPHQWAGLSPEVLRLFDSHPWPGNIRQLSSVVQVALALAQD
QPIRVEHLPDDFLADTDVRLTAQGRTGASASTSETVLFPMLANEPLRAQFEACHGNVSHL
ARHLGVSRNTLYKRLRAEGLYPT
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggccaacccagcccagcccatctcacaccaggctttggtaaaaggctcgtggagccgt
tgcgaacgctacggactacatccgctcagcatccccagctttggcgacccagcggagaga
gacgtcaatgccctgctggaacgtcagcgaaacctggtccagaccacgcagcgtgaagtg
ctgccttattacgagaacatcctttcgaattcgagctgcctgattctgcttgccgacagc
ggcggacagttgcttgagtcatggggtgacaggcgcttcgtcgaacccgcgcagcaacgc
ggattcaagccgggcgccagctggatggagcgagatactggaaccaatgcgatcggcacc
gcactggccagcgggcaagccgtgcatatccaacgtgacgagcacttcctccaggccaac
cgatatctgtccggcgcggcgtcgcccatttacgacgcgcaacgacagctgatcgcggtg
ctcgacgtgtccagcgacagctacctgccgccatcgcacacgctgggcatggtcaagatg
atgagccagtcggttgaaaacaggcttatcttgaatctgttccgcggtgattatttccag
ctgacgttcaataccggccaggacaatcttgatagtcagtgggccggtctgttggtcttc
gacgagtcggggctaatcgtttcagccaatcgacgtgcagacaatttgctgggcttggcg
cttactcgtagccgcatcgacaggctgttcgacgtcccgctgcggcagctgctcagccag
cccgaggaccagccgctgctgctgcggacagcgggcaatcatcgctttcatggccttgtt
cgacgcccccagaagccgcgtattcaggcccgtgattttcggacaccggatagccgaccg
gaacatatcatcgacctggcaagcatcgatcagggcgacccgcaggttcataaggtgatt
cgccaggctcagctcatgctcgaaaaggacattccgattctagtgaacggcgaaacgggt
gtcggaaaggaagtgctggtcaaagcactgcatgcggccagctcacgggcgaacgccccg
cttatagccgtgaattgcgcagcgattccctgcgagctgatcgagtccgaactcttcggc
tacgaaaaaggtgcattcaccggcgcgcaccagaaaggcagcctgggcctgatccgcaaa
gcagatggtggtgtgctgttcctcgatgaaatcggcgatatgccgctgagcttgcaggcg
cgtctgttgcgtgttctgcaggaacgcagcgtccagccgctgggcggcggtgagccctac
tcagtcgactttcgattgatctgcgcaactaaccgttcgctacgtcaggaagtcgaaaag
ggtcgctttcgtcaggatttgttctaccgggtcagcggcctcggcgtcgaattgccccca
ctccgcgcgcgttatgacaagtacgcccttttccaacgggtatgggaacagcaccgtgaa
ccacatcagtgggccggtctcagtccagaagtgctgcgcctgttcgacagccacccttgg
ccgggaaacatccgtcagctgagcagcgttgtgcaggtcgcgctagcgctggcccaggac
caaccgatccgagtggaacatctaccggatgatttccttgccgatacggacgtaaggctg
acggctcaaggtagaaccggggcctccgcctcgacaagcgaaacagtgctgtttccaatg
cttgcgaatgagcctctgcgggctcagttcgaagcctgtcacggcaacgtttcgcacttg
gcccggcatctcggtgtgagccgcaacaccttgtacaagcgtttgcgcgccgaagggttg
tatccgacataa
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