Stutzerimonas zhaodongensis: KQ248_16255
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Entry
KQ248_16255 CDS
T09079
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pzd
Stutzerimonas zhaodongensis
Brite
KEGG Orthology (KO) [BR:
pzd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pzd03032
]
KQ248_16255
03400 DNA repair and recombination proteins [BR:
pzd03400
]
KQ248_16255
Enzymes [BR:
pzd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KQ248_16255
DNA replication proteins [BR:
pzd03032
]
Prokaryotic type
DNA Topoisomerases
KQ248_16255
DNA repair and recombination proteins [BR:
pzd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KQ248_16255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QWV16057
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All DBs
Position
3583078..3584193
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AA seq
371 aa
AA seq
DB search
MLIDQDSETALHLAEGVRPLPAEEQMDTGTALCPELPADLHYVDDHVPGISRRKLGGKFA
YFLPTGERIRDTHEITRINKLAIPPAYSDVWICPDPQGHMQAIGRDARGRKQYRYHPRWR
EIRDGNKYERVLSFGTALPRMRERLEEHLALRGMPRQKVMALLVQLLESTLIRVGNPRYA
KENRSYGLTTLRTRHVDVRGSAIRFQFRGKSGVEHRVTLRNQRLARIVRRCMELPGQHLF
QYLDENGMRHPVNSSDVNAFIHEMTGGDFTAKDYRTWAGSALALDYLRKREWRPETVARR
NLVEVVKLVSHQLGNTPAVCRQCYIHPDVLEAFAAGELAQLGKARKRKWMSSEEVTLLKF
LSSRTAPTASS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgaccaggacagcgagacggctttgcacttagcggaaggtgtgcgaccgctt
ccggcggaagagcaaatggacaccggcaccgccctctgccctgagctaccagccgatctg
cactatgtagacgaccacgttcccggtatcagtcgacgaaagctcggaggcaaattcgcc
tacttcctgccgaccggagaacgtattcgggatacgcatgagataacgcgcatcaacaag
ctggccattcccccggcctactctgacgtctggatctgcccggatccgcaaggccatatg
caagcaattggacgagatgctcgcggacgcaagcaatatcgttatcacccccgctggcga
gagatccgggacggcaacaagtatgagcgggttctgtcgttcggtactgcccttccgcgg
atgcgcgagcgcctggaggagcacttggctttgcgcggcatgccgcgacaaaaagtgatg
gccttgctggtgcaattgcttgagtcgacgttgatccgagttggcaacccacgttatgca
aaggaaaaccgttcctacgggctcaccactctacgaacccgtcatgtcgatgtacgaggc
tctgcgatccgctttcagttccgtggcaaaagcggtgtagagcatcgcgtaacgctaagg
aaccagcggctggcgcgcattgtgcgccgctgcatggagctacccggccagcacctgttt
caatacctggacgaaaacgggatgcggcacccagtgaactcaagcgacgtcaacgcgttc
atccacgagatgaccgggggcgacttcacggccaaagattatcgaacttgggcaggcagt
gcgctggcgttggactatctgcgcaaacgtgagtggcgaccagagacggtggcgcggcgc
aatctggtcgaagtggtcaagctggtgtctcaccagctcggcaatactcccgccgtgtgt
cgccagtgctacattcatcccgacgtgcttgaagcctttgctgctggcgaactggcacag
ctgggcaaggccagaaagcgcaaatggatgagcagcgaggaagtcaccttgctgaaattc
ctgagcagccgcactgcgcccaccgcatcatcctag
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