Stutzerimonas zhaodongensis: KQ248_18080
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Entry
KQ248_18080 CDS
T09079
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pzd
Stutzerimonas zhaodongensis
Brite
KEGG Orthology (KO) [BR:
pzd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pzd03009
]
KQ248_18080 (rimO)
Enzymes [BR:
pzd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KQ248_18080 (rimO)
Ribosome biogenesis [BR:
pzd03009
]
Prokaryotic type
ribosomal protein modification factors
KQ248_18080 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAM_2
Radical_SAM
UPF0004
TRAM
RNase_II_C_S1
CLP1_P
YajR_YAM
DUF5005
Motif
Other DBs
NCBI-ProteinID:
QWV16385
LinkDB
All DBs
Position
3990645..3991967
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AA seq
440 aa
AA seq
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MSKTPTVGFVSLGCPKATVDSERILTQLRMEGYQIVASYEDADVVVVNTCGFIDSAKAES
LDAIGEAIAENGKVIVTGCMGVAEDNIRSVHPSVLAVTGPQQYEQVVNAVHQVVPPNIDH
DPFVDLVPPQGIKLTPRHYAYLKISEGCNHTCSFCIIPSMRGKLVSRPVGDVLSEAERLV
KAGVKEILVISQDTSAYGVDVKYKTDFWNGQPVKTRMLELCQALSSMGVWVRLHYVYPYP
NVDDVIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKKWREICPELTIRS
TFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPAEAMDLEAVPDDIKQDRWD
RFMAHQQAISAARLERKIGQELDVLIDEVDEDGAIGRSWADAPEIDGMVYVDSARPLQPG
EKVRVRVTNADEYDLWAEVI
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacgccaacagtcgggttcgtcagcctgggttgccccaaggcaacggtcgac
tctgaacgcatcctcacccagctgcgcatggagggttaccagattgtggcgtcctacgag
gacgccgacgtggtggtggtcaacacctgcggcttcattgacagcgccaaggccgagtcc
ctggatgccatcggtgaagccatcgccgagaacggcaaggtgatcgtcactggctgcatg
ggcgttgctgaagacaatatccgtagcgtgcaccccagcgttctggccgtaaccggccca
cagcagtacgagcaggtggtcaacgccgtacaccaagtggtgccgccaaacattgatcac
gatcccttcgtcgatctggtgccgccgcagggcatcaagctgaccccgcgtcactatgcc
tatctgaagatttctgaaggctgcaaccacacctgcagcttctgcatcatcccctccatg
cgcggcaagctggtcagccgtccggtgggcgacgtgctcagcgaggccgagcgcctggtc
aaagccggcgtgaaggagatcctggtgatctcccaggacaccagcgcctatggtgtcgac
gtcaagtacaagaccgacttctggaatggccagccggtcaagacgcgcatgctcgagctg
tgtcaggccctgtcgagcatgggcgtatgggtgcgactgcactacgtgtatccctacccg
aacgtcgatgacgtgatcccgctgatggctgcgggcaagatcctgccgtacctggacatc
cccttccagcacgccagcccgaaggtgctcaaggccatgaagcgcccggccttcgaagac
aagaccctggcccggatcaagaagtggcgggaaatctgcccggagctgaccatccgctcc
accttcatcgtcggctttcccggcgagaccgaagaggacttccagtacctgctcgactgg
ctgaccgaagcccagctcgaccgtgttggctgcttccagtactcgccggtcgagggtgca
cctgctgaagccatggaccttgaagccgtaccggacgacatcaagcaggaccgctgggac
cgcttcatggcccaccaacaggccatcagcgcggcgcgcctggaacgcaagattggccag
gaactggatgtgctcatcgacgaagtggacgaagacggcgccatcggtcgctcgtgggcc
gatgctcccgagattgacggcatggtctacgtcgacagcgcgcgcccgctccagcctggc
gaaaaggtccgcgtccgggtgaccaacgccgacgaatacgacctatgggccgaagtgatc
tga
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