Stutzerimonas zhaodongensis: KQ248_18950
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Entry
KQ248_18950 CDS
T09079
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pzd
Stutzerimonas zhaodongensis
Pathway
pzd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pzd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KQ248_18950 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pzd03400
]
KQ248_18950 (ruvB)
Enzymes [BR:
pzd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KQ248_18950 (ruvB)
DNA repair and recombination proteins [BR:
pzd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KQ248_18950 (ruvB)
RecFOR pathway proteins
KQ248_18950 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_22
AAA_16
AAA_17
Mg_chelatase
nSTAND3
TIP49
AAA_14
Rad17
AAA_28
RNA_helicase
ABC_tran
Resolvase
AAA_18
NTPase_1
Sigma54_activ_2
TsaE
AAA_24
NB-ARC
ATP-synt_ab
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QWV16532
LinkDB
All DBs
Position
complement(4175708..4176760)
Genome browser
AA seq
350 aa
AA seq
DB search
MIEADRLITATGRDREEQFDRAIRPLSLAEYIGQPVVREQMDLFIRAARGRKEPLDHTLI
FGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEEGDVLFVDEIHRLSP
IVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQR
LEFYSTADLATIVTRSAGILGLPIEAEGAVEIARRARGTPRIANRLLRRVRDFAEVRGNG
EISRNTADLALNMLDVDERGLDHQDRRLLLTLIEKFDGGPVGIDSLAAAISEERHTIEDV
LEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNLPKRLGDTPTPDLFGGDTE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagctgatcgtctgataactgccaccggtcgggaccgcgaggagcagttcgac
cgcgccatccgcccgctgagtcttgctgaatatattggtcagccggtggtgcgcgagcag
atggatctcttcatccgtgcggcgcgtgggcgcaaagaaccgctggatcacacgcttatc
tttggtccgccagggctgggtaagaccacgctggccaacatcatcgcccaggaaatgggt
gtctcgatcaaaagcacctcaggccccgtgctggaacggccgggtgatcttgcggcgttg
ctgacgaacctggaagagggtgatgtcctgttcgtcgacgagatccatcgactgtcgcca
atcgtggaggaagtgctttatcccgcgatggaggattttcagctcgacatcatgattggt
gagggccccgcggcacgctcgattaaactcgacttaccaccgtttacgctggttggcgcg
acgacgcgggccggcatgctcaccaatccgctgcgcgaccgtttcggtatcgtccagcgt
ctcgaattctactcgacggctgacctggcaacgatcgtaactcgatcagccggaatcctc
ggtctacctatcgaggcggaaggggcggtcgaaatcgcccgtcgcgcccgtggtacgccg
cgtattgccaatcgcctgctccgtcgggtgcgtgacttcgccgaagtgcgtggtaatggc
gaaatcagccgcaataccgcagacctcgcgctgaacatgctcgatgtcgatgagcgcggt
ctggatcaccaggatcgccgtttgctgctaacgctgatcgagaagttcgatggcggtccg
gttggcatcgacagcctcgcagctgctatcagcgaagaacgtcacaccatcgaggatgtg
cttgagccctatctgatccagcagggttacatcatgcgcaccccgagggggcgcgtcgtc
acgcgtcacgcctatctgcattttggtttgaatctgccaaaacgtttgggagatacgccg
actcccgaccttttcggtggcgacacagagtga
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