Stutzerimonas zhaodongensis: KQ248_19725
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Entry
KQ248_19725 CDS
T09079
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pzd
Stutzerimonas zhaodongensis
Pathway
pzd03030
DNA replication
pzd03430
Mismatch repair
pzd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pzd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KQ248_19725 (dnaE)
03430 Mismatch repair
KQ248_19725 (dnaE)
03440 Homologous recombination
KQ248_19725 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pzd03032
]
KQ248_19725 (dnaE)
03400 DNA repair and recombination proteins [BR:
pzd03400
]
KQ248_19725 (dnaE)
Enzymes [BR:
pzd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KQ248_19725 (dnaE)
DNA replication proteins [BR:
pzd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KQ248_19725 (dnaE)
DNA repair and recombination proteins [BR:
pzd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KQ248_19725 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QWV16664
LinkDB
All DBs
Position
complement(4324359..4327880)
Genome browser
AA seq
1173 aa
AA seq
DB search
MSVSFVHLRLHTEYSLVDGLVRVKPLVKSVAGAGMPAVAVTDQSNMCSLVKFYKAAQGAG
IKPICGADIWLASREEDGPLSRLTLLAMNSRGYRNLTELVSRGWTEGQRNDQIIIERDWV
KAAAEGLIALSGAKEGEIGHALLDGEEASAAALLDEWQAVFPQRFYLEVQRTSRVNDEEH
LHAAVALAQRCNVPLVATNDVRFLRQEDFEAHETRVCIGESRTLDDSRRPRNYSDQQYLK
TPEEMWELFSDLPEALENTVEIARRCNIEVQLGTYFLPDFPVPAGMTMDEYFRKVSFDGL
DERLEVLLPKDTPDYEAKKQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPVG
PGRGSGAGSLVAYVQKITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYVA
EKYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEMEE
PLRDFLAVDEDAREIWDMALKLEGITRGTGKHAGGVVIAPTKLTDFAPIACDDEGGSLVT
QFDKDDVESAGLVKFDFLGLRTLTIIKWAMETINREQAKKGLDPLNIDFIPLNDKPTFSL
LQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGRA
EISYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMGGYTLGQADMLRRAMGKKKPEE
MAKQRGGFIEGCANNGIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHHP
SPFMAAVLSADMHNTDKVVTLIEECRSMKLRIDAPDVNNSEFKFTVSDDGRIIYGLGAIK
GVGEGPVEAICECRKEGGPFKELFDFCSRVDLKRINKRTLEALIRGGALDRLGPYFSDEP
KAYQANIDRNRAVLLSAMEEAIQAAEQTARSLDSGHADLFGGLFAEPEADVYANHRKARE
LSLKERLKGEKDTLGLYLTGHPIDEYEGEVRRFARQRIIDLRPARGEQTIAGLIVNLRVM
KNKKGDKMGFITLDDRSGRIEASLFAEAFNSAQALLQTDALVVVEGEVSNDDFSGGLRLR
AKRVMSLEEARTGLAESLRVKVAGEALKGDRVRWLADVCGRHRGACPITLEYTSADARAL
LQFGEGWRIDPADNLIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtctccttcgtccatcttcgtctgcacactgaatattctctggttgacgggctg
gtgcgcgttaagccgctggtgaagtcggtggcaggcgctggcatgccggcggtggccgtc
acggatcagagcaatatgtgctcgctggttaagttctacaaggcggcgcagggcgccgga
atcaaaccgatctgtggcgccgatatctggctggcgagtcgcgaggaggatggtccgctc
agccgattgacgttactggcgatgaacagccgggggtatcgcaacctgaccgagctggtc
tctcgcggctggacggaaggccagcgcaacgatcagatcatcatcgagcgcgactgggtc
aaagctgccgcagaaggtctgatcgcgttgtccggcgccaaggaaggagaaattggccac
gcgctgctcgacggcgaagaagcctcagccgcggcgttgctcgacgagtggcaggcggtc
ttcccccagcggttctacctggaagtccagcgcaccagccgggtgaacgatgaagagcac
ttgcatgctgcggtcgcgttggcgcagcgctgtaacgtaccgctagtggctaccaacgat
gttcgttttctcaggcaagaagatttcgaggcacacgaaacccgcgtctgcattggtgag
agccgtacgctcgatgactcgcggcggccgcgtaactattctgatcagcagtacctgaag
acgcccgaggagatgtgggagctgttcagcgacctgcctgaggcgttggagaataccgtc
gaaattgctcggcgctgtaatatcgaagtgcagttggggacctacttcctgcctgatttc
ccggtacctgcgggcatgaccatggacgagtacttccgcaaagtctcgttcgacggcctc
gatgagcgtctcgaggtgttgctaccgaaggacacgcctgactacgaggcgaagaagcaa
gtctatgtcgaccggctgaatttcgagctcgacatcatcatccagatgggcttcccgggc
tacttcctgatcgtcatggacttcatccagtgggcgaagaacaacggcgttccggtaggg
ccgggacggggatcgggtgcgggatcactggtcgcctatgtgcagaaaatcactgacctc
gacccgctggcctatgatctgctgttcgaacgattcctcaatccggaacgggtttcgatg
cccgacttcgacgtcgatttttgtatggatggccgcgatcgggtcatcgattacgtggcg
gagaaatacggccgtaacgccgtcagccagatcattacctttggcaccatggccgcgaag
gcggtggtgcgtgatgtggcgcgggtgcagggcaagtcctatgggctcgctgatcggctg
tcgaagatgattcccttcgaagtcggcatgaccctcgaaaaagcctacgagatggaggag
ccgctgcgggactttcttgccgtcgacgaagacgcccgggaaatctgggacatggcgctc
aagctcgagggcatcacccgcggcaccggcaaacacgccggtggtgtggtgatcgcaccg
accaagctcactgatttcgcgcccatcgcctgtgatgatgagggcggtagcctggtaacc
cagttcgacaaggatgacgtcgaatccgccggcctggtcaagttcgacttcctcggcctg
cggaccctgaccatcatcaaatgggcgatggagacgatcaaccgggagcaagccaagaag
ggcctggatccgctgaacatcgacttcattccgctgaatgacaagccgacgttctcgttg
ctgcaaaaagctgaaacgacggcggttttccagcttgaatcgcgcggcatgaaagagctg
atcaagaagctcaagcccgactgcctggaagacctgattgctctggtggcgctgttccgt
cctggcccgctgcagtcgggcatggtggacgacttcatcaaccgtaagcatggtcgcgcg
gagatttcttacccgcactctgattaccagtacgaaggcctgaagccggtattggcgcct
acctacggcatcatcctgtaccaggaacaggtgatgcagatcgctcaggtcatgggtggc
tacaccctcggccaggcggacatgctgcgccgtgccatgggcaagaagaagcctgaggaa
atggccaagcaacgcggcgggttcatcgagggttgcgccaacaacggcatcgacgcggac
ctggcgggcaacatcttcgatctggtggaaaaattcgccggctacggtttcaacaaatcc
cactcggctgcctatgggcttgtttcctaccagaccgcctggctaaaggcgcatcatcca
tcgcccttcatggctgcggtgctgtctgcggacatgcacaacaccgacaaggtggtcacg
ctgatcgaggaatgccgcagcatgaagctgcgcatcgatgccccggacgtgaacaattcg
gagttcaagttcacggtcagtgacgatgggcgaatcatttacggcctgggtgcgatcaaa
ggcgtcggtgagggaccggtcgaagctatctgcgaatgccgcaaagaaggcgggccgttc
aaggaactgttcgatttctgcagtcgtgtcgatctcaagcgaatcaacaaacgcaccctc
gaagcgttgatccgcgggggggcattggatcgtctggggccgtacttttcggacgaacca
aaagcctaccaagccaatatcgatcgcaaccgggcggtgctgctctcggcgatggaagag
gctatccaggccgcggagcagacggcacgcagcctcgacagcggccatgcggacctgttt
ggtggactcttcgctgagcccgaagccgatgtttatgccaaccatcgcaaagcccgcgag
ctgtccttgaaggagcgtctgaaaggcgagaaggacacgctggggctatacctcacaggc
catccgatcgatgaatatgagggtgaggtccgccgcttcgcccgtcagcgcatcattgat
ttgcgccccgcgcggggcgagcagaccattgccggcttgatcgtcaacttgcgggtcatg
aagaacaagaaaggcgacaaaatgggcttcatcaccctggatgaccgttcgggacggatt
gaagcctcgctgtttgccgaagccttcaacagtgctcaggcgctgttgcagaccgatgcc
ctggtagtggtcgaaggtgaagtcagtaacgacgatttttcaggaggcttgcgcttgcga
gccaagcgagtcatgagcttggaagaagcccgaactgggctggccgagagcctgcgagtc
aaagtcgccggcgaggcactcaagggtgatcgagtgcgctggctggcggatgtctgtggc
cgtcatcgcggcgcctgtccgatcacgcttgagtacaccagtgccgatgcccgggccctg
ctgcagttcggtgaaggctggcgaatcgacccggccgacaacttgattcaggcattgcgt
gaccagttcgggcgcgacaacgtctttctgcaataccgatag
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