Stutzerimonas zhaodongensis: KQ248_20925
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Entry
KQ248_20925 CDS
T09079
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pzd
Stutzerimonas zhaodongensis
Pathway
pzd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pzd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KQ248_20925 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pzd03019
]
KQ248_20925 (rhlB)
Enzymes [BR:
pzd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KQ248_20925 (rhlB)
Messenger RNA biogenesis [BR:
pzd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KQ248_20925 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QWV16886
UniProt:
A0A365PQF0
LinkDB
All DBs
Position
4578979..4580397
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AA seq
472 aa
AA seq
DB search
MLKALKKMFGKGSNQPATTEVEISTSIHQGASDPAYYEKTKTQQDDAPKASPRPRRERAS
KPAAPPAPLWKLEDFAVEPAEGKTRFHDFKLAPGLMHAIHDLGFPYCTPIQAQVLGFTLK
GRDAIGRAQTGTGKTAAFLISTITQLLQTPPPADRYMGEPRALIIAPTRELVVQIANDAL
NLTKYTGLNVMSFVGGMDFDKQLKALESRYCDILVATPGRLLDFNQRGEVHLDMVEVLVL
DEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTEDVMNLAKQWTTDPAIVEIEAI
NVASDTVEQHVYAVAGSDKYKLLYNLITQNDWTRVMVFANRKDEVRRIEERLTRDGISAV
QMSGDVPQHKRIRALEGFREGKIRVMVATDVAGRGIHVDGISHVINFTLPEVPDDYVHRI
GRTGRAGASGTSISFAGEDDSFALPAIEALLGRTISCEMPPAELLAAVPPKR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaagcactaaagaagatgtttggcaaaggctcgaatcagcctgcgaccaccgaa
gttgaaatcagcacctcaatacaccagggcgccagcgacccggcgtactacgaaaagacc
aaaacgcaacaggatgatgcccccaaggccagccccaggccgcgccgtgaacgggcaagc
aagcctgccgccccgccggcgccactctggaagctggaagatttcgcagtcgagccagcc
gaaggcaagacccggtttcatgacttcaagctcgcccccgggcttatgcacgccattcac
gaccttggcttcccttattgcacaccgatccaggctcaggttctcggctttaccctcaaa
ggccgcgacgctattggccgggcccagaccggcaccggcaaaaccgccgcgttcctgatc
tcgaccatcactcagctgctacaaaccccaccacctgcggatcgatacatgggcgagcca
cgtgccctgatcatcgcgccgactcgtgagctggtcgtgcaaattgctaatgacgcgctg
aacttgaccaaatacaccggtttgaacgtcatgagttttgtcggcggcatggacttcgac
aagcaactcaaggcgctcgagtcccgctattgcgacatcctggtagcaacgcccggacgc
ctgctggacttcaatcagcgcggcgaagtgcacctggatatggttgaggtgctggtgctc
gacgaagcggatcgcatgctggacatgggcttcattcctcaggtccgccagatcattcgc
cagacgccccccaagagcgaacgccagacgttgctgttctcggccactttcaccgaagac
gtgatgaatctggccaagcagtggaccacggacccggccatcgtcgagattgaagcgatc
aacgtggccagcgacacagtcgaacaacacgtgtatgccgtggcaggcagcgacaaatac
aagttgctctacaacctcattacccagaacgactggacccgcgtgatggtcttcgccaac
cgcaaggatgaggtgcgtcgcattgaggagcgccttacccgcgatggcatcagcgctgtt
caaatgtcaggcgatgttccccaacacaagcgcatccgagcactggaaggtttccgcgaa
ggcaagattcgcgtgatggttgccaccgatgtcgccggccgcgggattcatgtcgatggc
atcagccacgtgatcaatttcaccctgccggaagtccccgacgactacgtccaccgcatc
ggccggaccggccgggccggggccagcggcacgtcgatcagttttgccggggaagacgat
tccttcgccctgccggcgatcgaggcattgctgggtcgaacgatcagctgcgaaatgccg
cctgctgagctgctggcagctgtcccacccaagcgctaa
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