Stutzerimonas zhaodongensis: KQ248_21465
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Entry
KQ248_21465 CDS
T09079
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pzd
Stutzerimonas zhaodongensis
Pathway
pzd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pzd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KQ248_21465 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pzd03019
]
KQ248_21465 (pnp)
03016 Transfer RNA biogenesis [BR:
pzd03016
]
KQ248_21465 (pnp)
Enzymes [BR:
pzd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KQ248_21465 (pnp)
Messenger RNA biogenesis [BR:
pzd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KQ248_21465 (pnp)
Transfer RNA biogenesis [BR:
pzd03016
]
Prokaryotic type
tRNA degradation factors
KQ248_21465 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
S1_2
KH_PNO1_2nd
ANAPC1
Motif
Other DBs
NCBI-ProteinID:
QWV16985
UniProt:
A0A365PS72
LinkDB
All DBs
Position
complement(4692046..4694151)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVTVLVAVTGAKTADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREARPSEKETLTSRLIDRPIRPLFPEGFQNEVQVICTVVST
SKKTDPDIAAMIGTSAALAISGIPFNGPIGAARVAFHPETGYLLNPTYEQLKASSLDMVV
AGTKDAVLMVESEAKELTEDQMLGAVLFAHDEFQAVVQAVTELAAEAGKPTWDWQPKAEN
TQLLNAIRSEFGEAISQAYTITIKQDRYARLGELKDQVVAKFSGEEGQPSAGEVKEAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRGLNIEVGVLDKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPYSVGECGRMGATGRREIGHGRLARRSVAAMLPSAD
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIQGITEEIMEIALGQALEARLNILGQMNQ
VIGQSRTELSANAPTMIAMKIDQDKIRDVIGKGGATIRSICEETKASIDIEDDGSIKIFG
ETKEAAEAAKQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDQRV
EKVTDVLKEGQEVKVLVLDVDNRGRIKLSIKDVAAAEASGA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagaaatttcaattcggtcaatcgaccgtaactctcgagactggc
cgtatcgcccgtcaagccagcggcgccgtactggtcaccgttgatgacgacgtgaccgtg
ctggttgccgtcactggcgctaaaactgcagacccgagcaagggctttttcccgctctcg
gttcactaccaagaaaaaacctacgcggccggcaagattcccggcggtttcttcaagcgt
gaagcgcgtccttccgaaaaggaaaccctgacctcgcgcctgatcgaccgaccgatccgt
ccgctgtttcccgaaggcttccagaacgaagtccaggtgatctgtactgtcgtttcgacc
agcaagaagactgatccggacatcgctgcgatgatcggtacttcggctgcgctggcgatt
tccggcattccgttcaacggtccgatcggcgctgctcgcgtcgccttccacccggaaacc
ggctacctgctgaatccgacctacgagcagctcaaggcctcgagcctggatatggtcgtt
gccggtaccaaagatgccgtactgatggtcgagtcggaagccaaagagctgaccgaagac
cagatgctgggcgcggtgctctttgcccacgacgagttccaggccgtagtgcaggccgtt
accgagttggcagccgaagcgggcaagccgacctgggattggcagccaaaggctgaaaat
actcagctgctcaatgccattcgcagcgaattcggcgaggcgatctcgcaggcgtacacc
atcaccatcaagcaggaccgctacgcgcgcctgggtgagctgaaagatcaggtcgttgcc
aagttctctggtgaggaaggccagccgtccgccggcgaagtcaaagaagccttcggtgaa
atcgaataccgcaccgttcgcgagaacatcgtaaacggcaagccgcgtatcgatggtcgt
gacacccgcactgtgcgcggtctgaacatcgaagtcggagtactcgacaagacccacggc
tcggcactgttcacccgtggcgaaacccaggcgctggtcgtggccaccctcggcactgcc
cgtgacgcgcagctgctggacacccttgaaggcgagaagaaagatcccttcatgctgcac
tacaacttccctccgtactcggtgggcgagtgtggccgcatgggcgctaccggtcgccgt
gaaatcggtcacggccgtctggctcgccgttcggtcgcggccatgctgccgagcgctgat
gagttcccgtacaccattcgcgtggtttcggagatcactgagtccaacggttccagctcc
atggcctcggtctgcggtgcttcgctcgcgctgatggacgccggtgtgccgatgaaggct
ccggtggccggtatcgccatgggtctggtgaaggaaggcgaaaagttcgcggttctgacc
gacattctgggtgacgaagatcacctgggtgacatggacttcaaggtggccggtaccgct
aagggcgtgaccgcgctgcagatggatatcaagatccagggcatcaccgaagagatcatg
gagatcgcgctgggtcaggcgcttgaagcgcgtctgaacattcttggccagatgaaccag
gtcatcggtcagtcgcgtaccgagctgtcggccaacgcgccgaccatgattgcgatgaag
atcgaccaagacaagatccgcgacgttatcggcaagggtggcgcgaccattcgcagcatc
tgcgaagagaccaaagcctcgatcgacatcgaagacgacggttcgatcaagatcttcggc
gaaaccaaggaggcagcagaggctgccaagcagcgcgttctcgggatcaccgctgaggcc
gagatcggcaagatctacgttggcaaggttgagcgaatcgtcgatttcggtgccttcgtc
aacatcttgccgggcaaggatggcctggtgcatatctcaatgctgagcgatcagcgcgtc
gagaaggttaccgatgtgctcaaggaaggccaggaagtgaaggttctggtgctggacgtc
gacaaccgcggccgtattaagctgtcgatcaaggatgtggctgctgccgaagcatccggc
gcataa
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