Stutzerimonas zhaodongensis: KQ248_21770
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Entry
KQ248_21770 CDS
T09079
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pzd
Stutzerimonas zhaodongensis
Pathway
pzd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pzd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KQ248_21770 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pzd03400
]
KQ248_21770 (recB)
Enzymes [BR:
pzd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KQ248_21770 (recB)
DNA repair and recombination proteins [BR:
pzd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KQ248_21770 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_25
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QWV17039
LinkDB
All DBs
Position
complement(4759484..4763167)
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AA seq
1227 aa
AA seq
DB search
MTAVNLNPLDFPLHGSRLIEASAGTGKTFTIALLYVRLVLGHGGDAAFKQALTPPQILVV
TFTDAATQELRDRIRARLNEAAQCFQAPDERHDPLLVKLRNGYPADQWPACARRLQLASE
WMDEAAVSTIHGWCYRMLREHAFDSGSLFTQTLETDQRELLDEVVRDYWRQQFYGLPPEV
ARVVTDSFKSPTELREALTPLLSRSDAEFQQAGMSITAPAHLDALLQGPADWAAQCVALE
AQARAAWANDIVALEALLHSARSALNGKSYPTKTPETFDQMLGDIAAWSQGGEASSHVRK
CGQARFKLNKGGAIGTHPAFQTIDAWVDHEESKQDIRAQLLLHALREVQGAFEEEKLRRA
QIGFDDLLNRLGRALEGPSGPRLAQTIRQQYPVALIDEFQDTDPVQYGIFDKIYCIGENL
PDCGLFMIGDPKQAIYSFRGADIYTYLKAREATKGRHYTLGTNYRSTQAMVDAANHCFKF
AEAHPRAAFRFAEEGKENQVPFEGVDAKGRSDTLEIEGEKQKALTLWQLQTNGVINNATY
LREASEVCASAIQAWLDRSAEKPSGLRNSDGQLTALKPADIAILVRSRKEAEAIRKALAR
RKLASVYLSDRDSVFESEEATDLLCILRACAQPTSDRLLRAALATRSVGISWQDLEQLNQ
NELCWEAHVQWFRDFRVLWQQQGVLPMLRRLLATFKVPARLLAEEQGERRLTNLLHLAEW
LQRSAAELDGEHALIRHLAEQIKEQSEEEILRLESDSDLIKVVTVHKSKGLEYPLVMLPF
ACSARAVDGRSKAPPMFHERQDEHYSLVLELAKGDPAKPAQKRADDERMGEEMRLLYVAL
TRARYATWICVAPQGFKTGGSSIDLHKSGLGYLLAGEGTVAPDWLAEVVDAFAKGCDDIA
VCKAPAQTEGVHVAPARPTVSEALRPLHALATNWWIASYSALAIADDRARMGAESPVAPE
PATALEANLQEQDDEQNPPAGVGIHAFPRGAGPGTFLHGLFEWAGDEGFGNAASDEQALH
DAVARRCNLRGWERWIDPLSAWLSHYLKAPLRFNGTQCTLAGLSTYQVEMEFWFSSRNVN
VERLDALVREHTLGGTPRLILAPNQLNGMFKGFIDLTFEHEGRYYVADYKSNWLGSTDSA
YVAEAMAETMLDKRYDLQLCLYLLALHRQLKLRLPGYDYEQHMGGALYLFIRGHQAPTHG
LHFERPPQQLIEQLDQLFMGQFEEASA
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggttaacctcaaccccctcgatttcccactgcatggcagccgcttgatcgaa
gcgagtgccggcaccggcaaaaccttcaccatcgccttgctgtacgtgcggctggtactg
ggccatgggggcgatgctgcgttcaagcaagcgctgacgccgccgcaaattctggtggtg
accttcaccgacgccgccacccaagagctgcgcgaccgcattcgcgcacgcttgaacgag
gctgcccagtgctttcaggcacctgatgagcgtcacgacccgctgctggtgaaactgcgc
aacggttaccccgccgatcagtggccggcctgtgctcgtcggttgcagttggccagcgag
tggatggacgaagccgcggtttcgaccattcatggctggtgctaccggatgctgcgcgag
cacgccttcgacagcggcagcctgtttacccagacactggaaaccgaccagcgcgagttg
ctcgatgaagtggtcagggactactggcgccagcagttctatggcctgccgcctgaggtt
gccagggtggtgacggatagcttcaaaagccccaccgagctacgcgaagcgctgacgccg
ctgctgtcgcgtagcgatgccgagtttcagcaggcagggatgtcgatcacagcgcccgcg
cacctggatgctttgcttcaggggcctgctgactgggctgcgcagtgtgtcgcgctcgaa
gcgcaggcaagggcggcctgggccaacgacatcgtggctctggaggcgttgctgcacagc
gcgcgcagcgcactgaacggcaagtcctaccccaccaaaacccccgaaacttttgatcaa
atgcttggcgatatcgccgcctggagccagggaggcgaagccagtagccacgttcgcaaa
tgcgggcaagcccgcttcaagctgaacaaaggcggtgccatcggcacgcacccagcgttt
caaaccatcgatgcttgggtcgaccatgaggagtcgaagcaggacatccgcgcgcagttg
ctgctgcatgctctgcgtgaagtgcagggcgccttcgaggaagaaaagctgcgccgggcg
cagatcggtttcgacgacttgctcaaccgccttggccgtgccctggaaggcccgtctggc
ccgcgcctggcgcagaccattcgccagcagtacccggtggccctgatcgacgagttccag
gacaccgacccggttcagtacggcatcttcgacaaaatctactgcattggagaaaacctg
cccgactgcggcctgttcatgatcggcgacccgaaacaggcaatctattcgttccgtggc
gccgacatctacacctacctcaaggcgcgtgaggctaccaagggccggcattacaccctg
ggcaccaactaccgctccacccaagcgatggtcgatgccgccaaccattgtttcaagttc
gccgaagcccacccccgagcagcgttccggtttgccgaggaggggaaggagaaccaggtg
ccgttcgaaggtgttgatgccaaaggccgcagcgatacgttggagatcgagggtgaaaag
cagaaggccctgaccctctggcagctgcaaaccaacggagtaatcaacaacgccacttac
ctgcgcgaggcctccgaggtatgcgcctcggcgattcaggcctggctcgaccgcagtgca
gaaaaaccctcgggcctgcgcaacagcgatggccaactcactgcactcaagcctgccgat
atcgccattctggtacgcagccgcaaggaagccgaagctattcgcaaggcccttgcgcgt
cgcaaactggccagcgtttatctgtctgaccgcgactcagtattcgaaagcgaagaagcc
accgacctgctgtgcatcctgcgggcctgcgcccagcccaccagcgaccgcttgctgcgt
gcggcattggccacccgcagcgtgggcatttcctggcaggacctggagcagttgaaccag
aacgagctgtgctgggaagcgcatgtgcagtggttccgcgacttccgcgtgctgtggcag
caacaaggcgtgctgcccatgctgcgcaggctgcttgcaaccttcaaggtgccggcccgt
ttgctggctgaagaacagggcgagcgccgcctgaccaacctgctgcacctggccgaatgg
ctgcagcgcagcgccgccgaactcgatggcgagcacgcgctgattcgccatctggccgag
cagatcaaggagcagagcgaggaagaaattctgcgcctggaaagcgactcggacctgatc
aaagtggtgaccgtgcacaagtccaagggcctggagtaccccttggtgatgttgccgttc
gcgtgcagcgccagggcggtggatggccgtagcaaggcgccgccgatgttccatgaacga
caggatgagcattacagcctggtgcttgaactggccaagggcgacccggcaaagcctgcg
cagaaacgcgctgacgatgagcgcatgggcgaggaaatgcgcctgctgtatgtcgccctg
acccgcgcccgctacgccacctggatctgcgtggcgccccaggggttcaagaccggaggc
tcgtcgatagacctgcacaagtcgggcttgggctacttgctggcaggcgaaggcacggtt
gcccctgattggttggctgaagtggtggacgccttcgcgaagggctgcgacgacatcgcg
gtgtgcaaggcccctgcgcaaaccgagggtgtccatgtggcacctgcgcgcccgacggta
agcgaggccttgcgcccgctgcatgcgctggcgaccaactggtggatcgccagctactct
gccttggccatcgccgacgaccgtgcgcggatgggcgccgagtcgccggttgcccctgag
cctgccaccgcgctggaagccaacctgcaagagcaggacgacgagcagaacccgcctgcc
ggcgttggtattcacgccttcccccgaggggcggggccgggcactttcctgcacgggctg
ttcgagtgggccggcgatgagggcttcggcaacgctgccagcgacgagcaagccctgcac
gacgccgtggcccggcgctgcaacctgcgcggctgggagcgctggatcgacccgctgtcg
gcttggttgagccattacctcaaggccccactgcgcttcaacggcacccagtgcacgcta
gccgggttgagcacctatcaggtcgagatggagttctggttctccagccgcaacgtgaac
gtcgaacgcctcgatgccttggtacgcgaacacaccctcggcggtacgccgcgactgata
ctggcgcccaaccagttgaacggcatgttcaaaggcttcatcgacctgaccttcgaacac
gagggccgctactacgtggcggactacaaatccaactggctgggcagcaccgatagcgcc
tatgtcgctgaggccatggccgaaaccatgctggacaaacgctacgatctgcagctgtgc
ctgtacctgttggccctgcatcgccagctcaagctgcgcctgcccggctacgactacgag
cagcacatgggcggggcgctgtacctgttcattcgtgggcaccaggcgcccacccatggc
ctgcacttcgagcggccaccgcagcaactgatcgagcagcttgaccaactcttcatgggc
cagttcgaggaggccagcgcatga
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