KEGG   Stutzerimonas zhaodongensis: KQ248_21770
Entry
KQ248_21770       CDS       T09079                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
pzd  Stutzerimonas zhaodongensis
Pathway
pzd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pzd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    KQ248_21770 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pzd03400]
    KQ248_21770 (recB)
Enzymes [BR:pzd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     KQ248_21770 (recB)
DNA repair and recombination proteins [BR:pzd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     KQ248_21770 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_25 AAA_11 AAA_30
Other DBs
NCBI-ProteinID: QWV17039
LinkDB
Position
complement(4759484..4763167)
AA seq 1227 aa
MTAVNLNPLDFPLHGSRLIEASAGTGKTFTIALLYVRLVLGHGGDAAFKQALTPPQILVV
TFTDAATQELRDRIRARLNEAAQCFQAPDERHDPLLVKLRNGYPADQWPACARRLQLASE
WMDEAAVSTIHGWCYRMLREHAFDSGSLFTQTLETDQRELLDEVVRDYWRQQFYGLPPEV
ARVVTDSFKSPTELREALTPLLSRSDAEFQQAGMSITAPAHLDALLQGPADWAAQCVALE
AQARAAWANDIVALEALLHSARSALNGKSYPTKTPETFDQMLGDIAAWSQGGEASSHVRK
CGQARFKLNKGGAIGTHPAFQTIDAWVDHEESKQDIRAQLLLHALREVQGAFEEEKLRRA
QIGFDDLLNRLGRALEGPSGPRLAQTIRQQYPVALIDEFQDTDPVQYGIFDKIYCIGENL
PDCGLFMIGDPKQAIYSFRGADIYTYLKAREATKGRHYTLGTNYRSTQAMVDAANHCFKF
AEAHPRAAFRFAEEGKENQVPFEGVDAKGRSDTLEIEGEKQKALTLWQLQTNGVINNATY
LREASEVCASAIQAWLDRSAEKPSGLRNSDGQLTALKPADIAILVRSRKEAEAIRKALAR
RKLASVYLSDRDSVFESEEATDLLCILRACAQPTSDRLLRAALATRSVGISWQDLEQLNQ
NELCWEAHVQWFRDFRVLWQQQGVLPMLRRLLATFKVPARLLAEEQGERRLTNLLHLAEW
LQRSAAELDGEHALIRHLAEQIKEQSEEEILRLESDSDLIKVVTVHKSKGLEYPLVMLPF
ACSARAVDGRSKAPPMFHERQDEHYSLVLELAKGDPAKPAQKRADDERMGEEMRLLYVAL
TRARYATWICVAPQGFKTGGSSIDLHKSGLGYLLAGEGTVAPDWLAEVVDAFAKGCDDIA
VCKAPAQTEGVHVAPARPTVSEALRPLHALATNWWIASYSALAIADDRARMGAESPVAPE
PATALEANLQEQDDEQNPPAGVGIHAFPRGAGPGTFLHGLFEWAGDEGFGNAASDEQALH
DAVARRCNLRGWERWIDPLSAWLSHYLKAPLRFNGTQCTLAGLSTYQVEMEFWFSSRNVN
VERLDALVREHTLGGTPRLILAPNQLNGMFKGFIDLTFEHEGRYYVADYKSNWLGSTDSA
YVAEAMAETMLDKRYDLQLCLYLLALHRQLKLRLPGYDYEQHMGGALYLFIRGHQAPTHG
LHFERPPQQLIEQLDQLFMGQFEEASA
NT seq 3684 nt   +upstreamnt  +downstreamnt
atgacagcggttaacctcaaccccctcgatttcccactgcatggcagccgcttgatcgaa
gcgagtgccggcaccggcaaaaccttcaccatcgccttgctgtacgtgcggctggtactg
ggccatgggggcgatgctgcgttcaagcaagcgctgacgccgccgcaaattctggtggtg
accttcaccgacgccgccacccaagagctgcgcgaccgcattcgcgcacgcttgaacgag
gctgcccagtgctttcaggcacctgatgagcgtcacgacccgctgctggtgaaactgcgc
aacggttaccccgccgatcagtggccggcctgtgctcgtcggttgcagttggccagcgag
tggatggacgaagccgcggtttcgaccattcatggctggtgctaccggatgctgcgcgag
cacgccttcgacagcggcagcctgtttacccagacactggaaaccgaccagcgcgagttg
ctcgatgaagtggtcagggactactggcgccagcagttctatggcctgccgcctgaggtt
gccagggtggtgacggatagcttcaaaagccccaccgagctacgcgaagcgctgacgccg
ctgctgtcgcgtagcgatgccgagtttcagcaggcagggatgtcgatcacagcgcccgcg
cacctggatgctttgcttcaggggcctgctgactgggctgcgcagtgtgtcgcgctcgaa
gcgcaggcaagggcggcctgggccaacgacatcgtggctctggaggcgttgctgcacagc
gcgcgcagcgcactgaacggcaagtcctaccccaccaaaacccccgaaacttttgatcaa
atgcttggcgatatcgccgcctggagccagggaggcgaagccagtagccacgttcgcaaa
tgcgggcaagcccgcttcaagctgaacaaaggcggtgccatcggcacgcacccagcgttt
caaaccatcgatgcttgggtcgaccatgaggagtcgaagcaggacatccgcgcgcagttg
ctgctgcatgctctgcgtgaagtgcagggcgccttcgaggaagaaaagctgcgccgggcg
cagatcggtttcgacgacttgctcaaccgccttggccgtgccctggaaggcccgtctggc
ccgcgcctggcgcagaccattcgccagcagtacccggtggccctgatcgacgagttccag
gacaccgacccggttcagtacggcatcttcgacaaaatctactgcattggagaaaacctg
cccgactgcggcctgttcatgatcggcgacccgaaacaggcaatctattcgttccgtggc
gccgacatctacacctacctcaaggcgcgtgaggctaccaagggccggcattacaccctg
ggcaccaactaccgctccacccaagcgatggtcgatgccgccaaccattgtttcaagttc
gccgaagcccacccccgagcagcgttccggtttgccgaggaggggaaggagaaccaggtg
ccgttcgaaggtgttgatgccaaaggccgcagcgatacgttggagatcgagggtgaaaag
cagaaggccctgaccctctggcagctgcaaaccaacggagtaatcaacaacgccacttac
ctgcgcgaggcctccgaggtatgcgcctcggcgattcaggcctggctcgaccgcagtgca
gaaaaaccctcgggcctgcgcaacagcgatggccaactcactgcactcaagcctgccgat
atcgccattctggtacgcagccgcaaggaagccgaagctattcgcaaggcccttgcgcgt
cgcaaactggccagcgtttatctgtctgaccgcgactcagtattcgaaagcgaagaagcc
accgacctgctgtgcatcctgcgggcctgcgcccagcccaccagcgaccgcttgctgcgt
gcggcattggccacccgcagcgtgggcatttcctggcaggacctggagcagttgaaccag
aacgagctgtgctgggaagcgcatgtgcagtggttccgcgacttccgcgtgctgtggcag
caacaaggcgtgctgcccatgctgcgcaggctgcttgcaaccttcaaggtgccggcccgt
ttgctggctgaagaacagggcgagcgccgcctgaccaacctgctgcacctggccgaatgg
ctgcagcgcagcgccgccgaactcgatggcgagcacgcgctgattcgccatctggccgag
cagatcaaggagcagagcgaggaagaaattctgcgcctggaaagcgactcggacctgatc
aaagtggtgaccgtgcacaagtccaagggcctggagtaccccttggtgatgttgccgttc
gcgtgcagcgccagggcggtggatggccgtagcaaggcgccgccgatgttccatgaacga
caggatgagcattacagcctggtgcttgaactggccaagggcgacccggcaaagcctgcg
cagaaacgcgctgacgatgagcgcatgggcgaggaaatgcgcctgctgtatgtcgccctg
acccgcgcccgctacgccacctggatctgcgtggcgccccaggggttcaagaccggaggc
tcgtcgatagacctgcacaagtcgggcttgggctacttgctggcaggcgaaggcacggtt
gcccctgattggttggctgaagtggtggacgccttcgcgaagggctgcgacgacatcgcg
gtgtgcaaggcccctgcgcaaaccgagggtgtccatgtggcacctgcgcgcccgacggta
agcgaggccttgcgcccgctgcatgcgctggcgaccaactggtggatcgccagctactct
gccttggccatcgccgacgaccgtgcgcggatgggcgccgagtcgccggttgcccctgag
cctgccaccgcgctggaagccaacctgcaagagcaggacgacgagcagaacccgcctgcc
ggcgttggtattcacgccttcccccgaggggcggggccgggcactttcctgcacgggctg
ttcgagtgggccggcgatgagggcttcggcaacgctgccagcgacgagcaagccctgcac
gacgccgtggcccggcgctgcaacctgcgcggctgggagcgctggatcgacccgctgtcg
gcttggttgagccattacctcaaggccccactgcgcttcaacggcacccagtgcacgcta
gccgggttgagcacctatcaggtcgagatggagttctggttctccagccgcaacgtgaac
gtcgaacgcctcgatgccttggtacgcgaacacaccctcggcggtacgccgcgactgata
ctggcgcccaaccagttgaacggcatgttcaaaggcttcatcgacctgaccttcgaacac
gagggccgctactacgtggcggactacaaatccaactggctgggcagcaccgatagcgcc
tatgtcgctgaggccatggccgaaaccatgctggacaaacgctacgatctgcagctgtgc
ctgtacctgttggccctgcatcgccagctcaagctgcgcctgcccggctacgactacgag
cagcacatgggcggggcgctgtacctgttcattcgtgggcaccaggcgcccacccatggc
ctgcacttcgagcggccaccgcagcaactgatcgagcagcttgaccaactcttcatgggc
cagttcgaggaggccagcgcatga

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