Pseudomonas zeae: HU754_000360
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Entry
HU754_000360 CDS
T07528
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pze
Pseudomonas zeae
Pathway
pze02025
Biofilm formation - Pseudomonas aeruginosa
pze03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pze00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HU754_000360 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU754_000360 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pze02044
]
HU754_000360 (tssM)
Secretion system [BR:
pze02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU754_000360 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
SRC-1
Motif
Other DBs
NCBI-ProteinID:
QXI11905
UniProt:
A0A9E6NPH5
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All DBs
Position
complement(76780..80319)
Genome browser
AA seq
1179 aa
AA seq
DB search
MKKFFKKVGAFLRQTWVWTLLLVLFVALLVWFVGPLLAVDDYKFWESSTSRLLTIAVLFL
IWGLTMVFVSWRAGIRKKAEEESEDGQDRIRREELIDEEQKELKARFKDALKTLKTSSLY
RGRSERWRSDLPWYLLIGPQASGKTSLLDFSGLEFPINKIDRKLTRDTLGTRHCDWYFAD
HGVLIDTAGRYMTQPDAEVDGSAWTTLLELLRKRRRGRPLNGVLVTIPVETLLGGSEQDI
DTLARQVRGRLQDVHQKLHVDVPVYLVLSKADKLLGFDEFFDQLTREESDQVLGTSFRKD
QVGTDVAVLRNEFEELLRRLNSQVIMRMHSERDTQRRGRILDFPHQLGQIGERLCLFVDM
AFTGNRYQRATQLRGFYLTSAPHLTQEMDATTAGIGASLGMSAGVLPTLRSGRSRFIHHL
FSQVIFPEADLAGLDKRERSRIHWGQRALYVGALASLALFGMLWAGGFSANYERLENLRN
LAQNWTQQRTALSPRDDAMGVLKTLDTSYAATQVFPKKGDVSYHERGGLYQGEDVNPVVK
EAYERELEKQLLPRVATMLEGQIRANMKDRDRLLNSLRAYLMLNMKDRRDAAWLKDWVAT
DWSTRYTGNTAVQNGLSAHLDRLLKQPFIYPLNDQLVTQARQVLRSESLATVVYRMLREQ
ARNLPDYRFSQHLGPQGSLFIGTEYVIPGFYTQTGYQQYFSVQGSALVTDILRDNWVLGE
GAGISDMDLRRLMVELEQLYFRDYANYWSEAVGQVALPPISDAGEGAEQLAGLTSANSPV
LALLTEVRENTRFQAAADPVEEAGDAADALAGQKGKLGKVGKLASAVADKASALNVAKTL
PDTAKKSLQRRFEPLHRLLDDNNGPAADLTPALSALNDLQLQLAGLARSSTPEQAAFEMA
KTRMSGQRDALTNLRNASGRLPRPLSVWFNVLAEDSWRLVLNDAYQYLNGRYQNELYSVY
GKTISKRYPFSASSTSDVAISDFREFFRAQGTVDRFFDSYLRPFVSGDPGNYRMRSVDGH
SLPVSKMYLDQMAAALTIRQSFFSINPAEPTVQFKLEPYTLDPAVSRSEFKFGDKTMEYR
HGPILPMSFKWPTDAEDGRTSLVMDKMAGRPIGIEKNSGPWSLFRLFDLMQTEYLSGRDV
LVLKADVGGLRANYLLTSQRTPNPFDMGVLRTFRMPVQL
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttttcaagaaagtcggcgccttcctgcgccagacctgggtctggaccttg
ctgctggtgctgtttgtggcgctgctggtgtggttcgtcggcccgttgttggcggttgat
gactacaagttctgggagagctcgacctctcgcttgctgaccattgccgtgctgttcctg
atctggggcctgaccatggtcttcgtcagctggcgcgcgggtatccgcaagaaagccgag
gaagaaagcgaggacggccaggaccgcattcgccgcgaagagctgatcgacgaagaacag
aaggagttgaaggcgcgcttcaaagacgcgctgaaaaccctgaagacttccagcctgtat
cgcggccgcagcgagcgctggcgcagtgacttgccgtggtacctgctgatcggtccgcag
gcttccggcaagaccagcctgctggacttttccggtctggaattcccgatcaacaagatc
gaccgcaagctgacccgcgacaccctcggcacccgtcattgcgactggtacttcgccgac
cacggtgtgctgatcgacaccgccgggcgctacatgacccagcctgacgcggaagtcgac
ggcagcgcctggaccaccttgctggagctgctgcgcaagcgccgtcgcgggcgtccgttg
aacggcgtgctggtgaccattccggtggaaaccctgcttggcggcagtgagcaggacatc
gataccctcgcacgccaggttcgcggccgtctgcaagacgtgcatcagaaactgcacgtc
gacgtgccggtgtacctggtcctgagcaaggctgacaagctgctcggcttcgacgagttc
ttcgatcaactgactcgcgaagaaagcgatcaagtgctcggcaccagtttccgcaaggat
caggtcggcaccgacgtcgctgtgctgcgcaacgagttcgaagaactgctgcgtcgcctc
aacagccaagtgatcatgcgcatgcactccgagcgcgacactcagcgccgtggtcgcatc
ctcgacttcccgcatcaactcgggcagatcggcgagcgcctgtgcctgttcgtcgacatg
gcgttcaccggcaaccgttatcagcgtgccacgcaactgcgcggtttctacctgaccagc
gcgccgcacctgacccaagagatggatgccaccaccgccggcatcggcgccagtctcggc
atgagcgccggcgtgctgccgaccctgcgcagcggccgttcgcgtttcatccatcacttg
ttcagccaggtgattttcccagaggccgatctggccggtctggacaagcgcgaacgcagc
cgcatccattggggccagcgtgccctgtacgttggtgcactggcgtcgttggcactgttc
ggtatgctttgggcgggcggcttttcggccaactacgagcgcctggaaaacctgcgcaat
ctggcgcagaactggacgcaacagcgcacagctttgtcgccgcgtgatgacgccatgggc
gtgctgaaaaccctcgacaccagctacgccgcaacccaggtctttccgaaaaagggcgac
gtttcgtatcacgaacgtggcgggctgtatcaaggtgaagacgtcaatccagtggtcaaa
gaggcttacgagcgcgagcttgaaaagcaactgctgccacgggtggcgaccatgctcgaa
gggcagatccgcgccaacatgaaggaccgcgaccgcctgctcaacagcctgcgcgcgtac
ctgatgttgaacatgaaggatcgtcgcgatgccgcgtggctcaaggactgggtcgctact
gactggtcgacgcgctataccggcaacaccgccgtacagaacggtttgagtgcgcacctc
gatcgcctgctgaagcagccgtttatctacccgctgaacgaccaattggtcactcaggcg
cgtcaggtattgcgcagcgaatcgctggccaccgtggtttaccgcatgctccgcgagcag
gcgcgcaacctgccggactatcgtttcagccaacacctcggcccacaaggctcgctgttt
atcggcaccgaatacgtgatcccgggtttctacacgcaaaccggttatcagcagtacttc
tcggtacagggttcggcgctggtcaccgacatcctgcgtgacaactgggtgctgggtgaa
ggcgccggcatcagcgacatggacttgcgtcgtctgatggtcgagctggagcagttgtat
ttccgcgactacgccaattactggagcgaagccgttggccaggttgccctgccgccaatc
agcgacgccggtgaaggcgccgaacaactggcgggcctgacttcggccaactcgccggtg
ctggcattgctcactgaagtgcgtgagaacacgcgcttccaggccgctgcagatcctgtc
gaagaagctggcgacgctgctgatgcactggccgggcagaaaggcaaactgggtaaagtc
ggtaaactggcctcggctgtcgcggacaaggcttcggccctgaacgtggcgaagaccctg
ccggacaccgcgaagaagtcgctgcaacgccgcttcgaaccgctgcatcgtttgctcgat
gacaacaacggcccggcggcggatctgacgcctgcgctgagcgcgctcaacgacctgcaa
ctgcaactcgccggtctggcccgttccagcacacctgaacaagccgcgttcgaaatggcg
aaaacccgcatgagcggccagcgtgatgcgctgaccaacctgcgcaatgcctccggccgt
ctgccgcgtccgctcagcgtgtggttcaacgtgctggccgaagactcgtggcgtctggtg
cttaacgatgcttaccaatacctgaacggccgttatcagaacgagctgtacagcgtgtat
ggcaaaaccatcagcaagcgttatccgttcagcgccagcagcaccagcgacgtagcgatc
agcgacttccgcgagttcttccgggctcaaggtaccgtcgaccgcttcttcgacagctac
ctgcgtccgttcgtcagcggcgatccgggcaactaccgcatgcgcagcgtcgacggccac
agcctgccggtgtcgaaaatgtatctggaccagatggcggcggcgctgacgattcgtcag
agcttcttctcgatcaacccggccgagccgaccgtgcagttcaaactggagccgtacacc
ctcgacccggcggtcagccgttccgagttcaagttcggcgacaagaccatggagtaccgc
cacggtccgatcctgccaatgtcgttcaaatggccgaccgatgctgaagacggtcgtacc
agtctggtcatggacaaaatggccgggcgcccgatcggcatcgagaagaactccggccca
tggtcgctgttccgtctgttcgacctgatgcagaccgagtacctgagcggtcgcgacgtg
ctggtgctgaaagccgacgtaggtggcctgcgcgccaactacctgctgaccagccagcgc
acgccgaacccgttcgacatgggcgtactgcgcaccttccgtatgccggtgcagctctga
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