KEGG   Pseudomonas zeae: HU754_000390
Entry
HU754_000390      CDS       T07528                                 
Name
(GenBank) sigma 54-interacting transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
pze  Pseudomonas zeae
Brite
KEGG Orthology (KO) [BR:pze00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pze03000]
    HU754_000390
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pze02044]
    HU754_000390
Transcription factors [BR:pze03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    HU754_000390
Secretion system [BR:pze02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   HU754_000390
SSDB
Motif
Pfam: Sigma54_activat AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 HTH_30 GAF_2 GAF HTH_50 AAA_2 AAA_16 AAA_7
Other DBs
NCBI-ProteinID: QXI11911
UniProt: A0A9E6NQ57
LinkDB
Position
complement(84503..86023)
AA seq 506 aa
MFTQVPQPLVYAEALLAQFASLSRAADGAALLGDFVRGLAELSGCELTQLYLLDATHTCL
GMNAECLDGALQPREAASLPADYNGEQLLQFALCQNRVVCLDDLSGSLHETSFLPAATSP
WQSLLCVPLVNQHKAVEGLLLCASRRRTNLQGFADSLGQLGSFVLGQLHLLQRLRQPLAE
SATVARSVPSISGYGLIGKSAAMRQTHSLISKVLHSPYTVLLRGETGTGKEVVARAIHDC
GPRRSQAFIVQNCAAVPENLLESELFGYRKGAFTGADRDRAGLFDAANGGTLLLDEIGDM
PLSLQAKILRVLQEGEIRPLGSNDTHKIDVRIIAATHRDLSTLVSEGKFREDLYYRLAQF
PIELPALRQREGDILELAQHFAEKTCTYLQRDPVRWSSAALEHLSGYNFPGNVRELKALV
ERAVLLCEGGELLAEHFSLRMEAMPEDNSHLNLRERLEQVERTLLLDCLRKNDGNQTLAA
RELGLPRRTLLYRLGRLNINLGDFDG
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgttcactcaggtgccgcagccactggtctatgccgaagcgttgctggcgcagttcgcc
agtctgtcgcgggcggcggacggtgctgcgttgctgggtgacttcgtgcgtgggctggcc
gagttgagcggttgcgaattgacgcagctgtatctgctcgacgccacccacacgtgcctg
gggatgaacgccgaatgcctcgacggcgccttgcaaccgcgtgaagcggcgagcctgccg
gcggattacaacggtgaacaactgctgcagtttgccctgtgccagaaccgcgtggtgtgc
ctcgacgacttgagcggcagcttgcacgaaaccagtttcctgccggcggcgacctcgccg
tggcagtcgctgctgtgcgtgccgctggtcaatcagcacaaggctgtcgaaggtctgctg
ctgtgcgccagccgtcgtcgtaccaacctgcaaggcttcgccgattccctcggccagctc
ggctcgttcgtgctgggccagttgcatttgctgcaacgcctgcgccagccactggcggaa
tcggccacggtggcgcgcagcgtgccgagcatcagtggctatggcctgatcggcaaaagc
gcggcgatgcgtcagacccattcgctgatcagcaaagttctgcacagcccgtacaccgtg
ttgttgcgtggtgaaaccggtaccggcaaggaagtcgttgcgcgggcgattcacgattgc
ggcccgcgccgttctcaggcgttcatcgtgcagaactgcgcggcggttccggaaaacctg
ctggaaagcgagctgttcggctatcgcaaaggcgccttcaccggtgccgaccgcgaccgt
gcggggctgttcgatgcggccaatggcggcacgctgttgctcgacgagatcggcgatatg
ccgctgtcgttgcaagcgaagattctgcgcgtgttgcaggaaggcgagattcgtccgctg
ggttccaacgacacccacaaaatcgacgtacgcatcatcgccgcgacccaccgcgatctg
tcgacgctggtcagcgaaggcaaattccgcgaggacttgtactaccgcctcgcgcaattc
ccgatcgagctgccggcgctgcgtcagcgtgaaggcgacatcctcgaactggcccagcac
ttcgccgagaagacctgcacgtatttgcaacgcgatccggtgcgttggtcgagcgcggcg
ctggaacacctgtccggctacaacttccccggcaacgtgcgtgaactcaaggccttggtc
gaacgtgcggtgctgttgtgcgagggcggcgagttgctcgccgagcatttctccctgcgc
atggaggcaatgccggaagacaacagccacctgaatttgcgtgaacgcctcgagcaggtc
gaacgcacgttattgctcgattgcctgcgcaaaaacgacggcaaccagacccttgccgcc
cgtgaactgggcttgccgcgacgcacgctgctgtatcggctcggccgtctgaacatcaat
ctgggagatttcgatgggtag

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