Pseudomonas zeae: HU754_000445
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Entry
HU754_000445 CDS
T07528
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pze
Pseudomonas zeae
Pathway
pze02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pze00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU754_000445 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pze02044
]
HU754_000445 (tssC)
Secretion system [BR:
pze02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU754_000445 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
QXI11920
UniProt:
A0A9E6NPI4
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All DBs
Position
complement(95655..97130)
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AA seq
491 aa
AA seq
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MSTSAAQEKSAASGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVK
KAMVDRMIAEIDAKLSRQMDEILHHPDFQALESSWRGLQLLVDRTNFRENIKIEILNVSK
EDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVASV
SCMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRTSEDSRYVGLTVP
RFLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
SSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagcgcagcacaagagaagagcgccgccagcggcgaatacagcattctcgac
agcatcatcgccgaaacccgtctgactccggacgacgaagcctacgacatcgccaagcgc
ggtgtgtcggccttcatcgaagaactgctcaagccgcagaacaacggtgagccggtcaag
aaggccatggttgaccgcatgatcgccgagatcgatgccaagctcagccgtcagatggac
gagatcctgcaccacccggacttccaggctctggaatcgtcgtggcgtggtctgcagttg
ctggttgaccgcaccaacttccgcgaaaacatcaagatcgaaatcctcaacgtctccaaa
gaagacctgctggacgatttcgaagattcgccggaagtcatgcagtcgggcctgtacaag
cacatctacaccgctgaatacggccagttcggtggtcagcctgtgggcgcgatcatcgct
aactactacatgtcgccaagctcgccagacgtgaagctgatgcagtacgtcgccagcgtt
tcgtgcatgtcgcacgcgccgttcatcgctgccgccggcccgaaattcttcggtctggaa
agcttcactggcctgccggatctgaaagatctgaaagaccacttcgaaggcccgcaattc
gccaaatggcagagcttccgtacttcggaagactcccgttatgttggcctgaccgtgccg
cgtttcctgctgcgtaacccgtacgatccggaagaaaacccggtcaaatcgttcgtgtac
aaggaaaccgttgccaacagccacgagcactacctgtggggcaacactgcttacgcgttc
ggcaccaagctgaccgacagcttcgccaaattccgctggtgcccgaacatcatcggccca
caaagcggtggcgcggttgaagacctgccgttgcaccatttcgaaagcatgggcgaaatc
gaaaccaagatccctaccgaggttctggtttccgaccgtcgtgaatacgaactggccgag
gaaggcttcatctccctgaccatgcgtaaaggctccgacaacgcggcgttcttctccgcc
agctcggtgcagaagccgaagttcttcggcatcagcgcagaaggcaaggccgcagagctg
aactacaagctcggcacccaactgccgtacatgatgatcgtcaaccgcctggctcactac
ttgaaagtgctgcagcgcgagcaactcggttcgtggaaagagcgtaccgacctcgagctg
gaactgaacaagtggatccgtcagtacgttgccgaccaggaaaacccgagcgccgaagtg
cgtggccgtcgtccgctgcgcgctgcgcaagtgatcgtcagcgacgttgaaggcgagccg
ggctggtaccgcgtgagcttgaacgtgcgtccgcacttcaagtacatgggtgccgatttc
accctgtcgctggttggcaagctggacaaagagtaa
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