Pseudomonas zeae: HU754_001055
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Entry
HU754_001055 CDS
T07528
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pze
Pseudomonas zeae
Brite
KEGG Orthology (KO) [BR:
pze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pze03032
]
HU754_001055 (gyrB)
03400 DNA repair and recombination proteins [BR:
pze03400
]
HU754_001055 (gyrB)
Enzymes [BR:
pze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HU754_001055 (gyrB)
DNA replication proteins [BR:
pze03032
]
Prokaryotic type
DNA Topoisomerases
HU754_001055 (gyrB)
DNA repair and recombination proteins [BR:
pze03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HU754_001055 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QXI12037
UniProt:
A0A9E6TBH5
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All DBs
Position
236101..238518
Genome browser
AA seq
805 aa
AA seq
DB search
MSEENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD
ISIIIHPDESITVKDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSEELVLTVRRSGKIWEQTYVHGVPQAPMAIVGDSETTGTQIHFKASSETFKN
IHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTAVNQV
FHFNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIEQ
EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSD
FLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE
LYLVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIG
RDEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKK
GKQEQYIKDDDAMEEYMTQSALEDASLHLNEEAPGISGEALERLVNDFRMVMKTLKRLSR
LYPQELTEHFIYLPAVSLEMLGDHAKMQDWLAQYEVRLRTVEKSGLVYKASLREDRERGV
WLPEVELISHGLSNYVTFNRDFFGSNDYKTVVTLGAQLSTLLDDGAYIQRGERKKAVTEF
KEALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPSVRRMLKVTIEDAIGADQIFNT
LMGDAVEPRRDFIESNALAVSNLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaagaaaatacgtacgactcaacgagcattaaagtgctgaaaggcctggatgcc
gtacgcaaacgtcccggtatgtacattggtgacactgacgatggcagcggtctgcaccac
atggtgttcgaggtggtcgacaactcgatcgacgaagccctcgccggccactgcgacgac
atcagcatcatcatccacccggatgagtccatcaccgttaaagacaacggccgtggcatc
ccggtagacgtgcacaaagaggaaggcgtttccgccgccgaggtcatcatgaccgtcctc
cacgctggcggtaagttcgacgacaactcctacaaggtctccggcggtctgcacggcgta
ggtgtatcggtagtgaacgcactgtccgaagaactggtcctgaccgttcgccgcagcggc
aagatctgggaacagacctacgtccacggcgtacctcaggcaccgatggccatcgttggc
gacagcgaaaccaccggtacccagatccacttcaaggcttccagcgaaaccttcaagaac
attcacttcagctgggacatcctggccaagcgcattcgtgaactgtccttcctcaactcc
ggtgtcggcatcgtcctcaaggatgagcgcagcggcaaggaagagctgttcaagtacgaa
ggcggcttgcgggcgttcgttgaatacctgaacaccaacaagactgcggtcaaccaggtg
ttccacttcaacatccagcgtgaagacggcatcggcgtggaaatcgccctgcagtggaac
gacagcttcaacgagaacctgttgtgcttcaccaacaacattccgcagcgcgacggcggt
acccacctggtgggcttccgctcggccctgacgcgtaacctgaacaactacatcgagcag
gaaggtctggcgaagaagcacaaagtcgccaccaccggtgatgatgcccgtgaaggcctg
accgcgatcatctcggtgaaagtgccggatccgaagttcagctcgcagaccaaagacaaa
ctggtgtcttccgaagtgaagactgcggtcgagcaggagatgggcaagtacttctccgac
ttcctcctggaaaacccgaacgaagccaagctggtcgtcggcaagatgatcgacgctgcc
cgtgcccgtgaagcggcgcgtaaagctcgtgagatgacccgccgcaaaggcgcgctggac
attgccggtctgccaggcaagctcgctgactgccaggaaaaagaccctgcgctgtccgaa
ctgtatctcgtggaaggtgactccgcgggcggctctgccaagcagggacgtaaccgcaag
acccaggcgatcctgccgttgaagggcaagatcctcaacgtcgagaaagcgcgtttcgac
aagatgatctcttcccaggaagtgggcaccttgatcaccgcgctgggctgcggcatcggt
cgcgacgaatacaacatcgacaagctgcgttatcacaacatcatcattatgaccgatgct
gacgtcgacggttcgcacatccgtaccctgctgctgaccttcttcttccgtcagttgccg
gagctgatcgagcgcggctacatctacatcgcccagccgccgctgtacaaggtcaagaaa
ggcaagcaagagcaatacatcaaagacgacgacgccatggaagagtacatgacgcaatcg
gctctggaagatgcgagcctgcacctgaacgaagaggccccaggcatttccggtgaagct
ttggagcgtctggtaaacgacttccgcatggtgatgaagaccctcaagcgtctgtcgcgc
ctgtacccgcaagagctgaccgagcacttcatctacctgccggccgtgagcctggaaatg
cttggcgaccacgccaagatgcaggactggctggcccagtacgaagtccgtctgcgcacc
gtcgagaagtccggtctggtctacaaggccagcctgcgtgaagaccgtgaacgtggtgta
tggctgccggaggtcgaactgatctcccacggcctgtcgaactacgtcaccttcaaccgc
gacttcttcggcagcaacgactacaaaaccgtcgtcaccctcggcgctcaactgagcacc
ctgctcgacgacggcgcgtacatccagcgtggcgagcgcaagaaggcagtcaccgagttc
aaggaagccctcgactggctgatggcggaaagcaccaagcgtcacaccattcagcgatac
aaaggtctgggcgaaatgaacccggatcagctgtgggaaaccaccatggacccaagcgtg
cgccgcatgctgaaggtcaccatcgaagacgccattggcgcagaccagatcttcaacacc
ctgatgggtgatgcggtcgaacctcgccgtgacttcatcgagagcaatgcgttggcggtt
tctaacctggatttctga
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