Pseudomonas zeae: HU754_004910
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Entry
HU754_004910 CDS
T07528
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pze
Pseudomonas zeae
Pathway
pze03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HU754_004910 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pze03400
]
HU754_004910 (recB)
Enzymes [BR:
pze01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HU754_004910 (recB)
DNA repair and recombination proteins [BR:
pze03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HU754_004910 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
AAA_25
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QXI12755
UniProt:
A0A9E6TCH3
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All DBs
Position
1137010..1140699
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AA seq
1229 aa
AA seq
DB search
MITKTPLALAFPLQGSQLIEASAGTGKTFTISALYLRLILGHGDEASGFGRELLPPQILV
VTFTDAATKELRERIRTRLAEAARFFRDETPAPDALIAELRDQFDSPQWPGCANRLDVAA
QWMDEAAVSTIHSWCQRMLREHAFDSGSLFTQSLETDHSELLGEVLRDYWRLFCYPMQGD
ALNWVRSNWGGPAALLPRVRGLFASERDSDEGKAPAELIDECLQERRAALIELKRPWRQW
ADELLAICHQGVASKTVDGRKMQARYFEPWFEKLKAWAEDESLEQLDIGTGFTRLTPDGM
AEAWKGQAPSHPGLDAMPKLKSSLDALPTPDAAVLQHAAKWVGARFEEEKRRRAEMGFDD
MLLRLDAALQSDGGERLATLIREQFPVALIDEFQDTDPVQYRIFESIYRIEDNSPETGLF
LIGDPKQAIYAFRGADIYTYLRARQATTGRLHTLGTNFRSSHGMVNAVNHVFARAESREQ
GRGAFLFREKNGDNPVPFLPVESQGRKEQLQVAGQAVAALNVWLLSTDQPLSGAVYRQQL
AAACASEITSLLNGGQNASAGFIQDGKDFRGLRPSDIAILVRDGKEAQAVRGELAARGVR
SVYLSDKDSVFAAQEAHDLLSWLKACAEPDVERSLKAALACITLNLPLAELERLNQDELV
WETRVMQFRGYRELWRKQGVLPMLRRLLHDFHLPQTLMTRTDGERVLTNLLHLSELMQQA
AAELDGEQALIRHLAELLAVSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYPLVFLPFI
CSAKPVDGSRLPLHYHDAEGKAQVSLKPTAELVAQADDERLAEDLRLLYVALTRAQHACW
LGVTDLKRGNNNSSVLHLSALGYLLGGGASLGESSELKRWLQDLQQDCPAIHIDEMPQPT
DEHYQPPRNDAVLSATLLPKRKASENWWIASYSALRISDVLSGGSDEAPDSPQAQKLFDD
ERLDPDAPREIIAGGADIHRFPRGPNPGTFLHGLLEWAGDDGFAVSREALEDAIARRCNL
RGWEGWITTLSDWLQHLLKSPLPIAGGQPPVVLEQLKQYRVEMEFWFASHKVDVVKLDEL
VRQHTHRGVARVAAEPVQLNGMFKGFIDLTFEHDGRYYVADYKSNWLGVDDQAYTEQAME
QSILDNRYDLQYVLYLLALHRQLKARLPDYDYDRHVGGALYLFLRGTRADSRGVYFARPP
RELIERLDRMFQGKPEPKSEPAWEQGVLL
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgattaccaagacacccctcgcactggcattcccgctacagggcagccagttgatcgaa
gccagtgccggtaccggtaaaacctttaccatttcggctttgtatctgcggcttatcctc
gggcatggtgacgaggcgagtggattcggccgagaattgttgccaccacagattctcgtg
gtgaccttcaccgatgccgcgaccaaggaactgcgtgagcgcatacgcacgcgtctggct
gaggccgcgcgattctttcgtgacgaaacgcctgcgcccgacgcgctgatcgccgaattg
cgtgatcaattcgactccccacaatggcccggttgcgccaaccgcctcgatgtcgccgcg
caatggatggacgaggcagctgtctcgacgatccacagttggtgtcagcgcatgctgcgt
gagcatgcgttcgacagcggcagcttgttcacccaatccctggaaaccgatcacagcgag
ttgctcggcgaagtgctgcgcgattactggcggctgttctgttacccgatgcagggcgat
gccttgaattgggttcgcagcaattggggtgggccggcggcgttgttgcctcgggtgcgc
ggcctgtttgccagcgagcgtgacagcgacgagggcaaggcgcctgcggagctgatcgat
gaatgtctgcaagaacgccgtgccgcgctgatcgagctgaaaaggccatggcgtcagtgg
gcagacgaattgctcgccatctgtcatcaaggtgttgcgagcaaaactgtcgacggtcgc
aagatgcaggcgcgttacttcgaaccgtggttcgaaaagctcaaggcatgggccgaagat
gagtccctggagcaactggatatcggcaccggtttcacccgactgactcccgacgggatg
gccgaagcgtggaaaggccaagctcccagtcaccccggcctggacgcgatgccgaagctc
aagtcgagcctcgatgcattgcccactcctgatgccgctgtgctgcaacatgccgccaaa
tgggtaggcgcgcgctttgaagaagagaagcggcgtcgcgccgagatgggcttcgacgac
atgttgttgcgcctggatgccgctctgcaatccgacggaggcgaacgtcttgcgacgttg
attcgcgagcagttcccggtcgcgctgatcgatgagtttcaggacaccgacccggtgcag
taccgaatcttcgaaagtatctatcgcatcgaagacaacagtcctgagaccggcctgttc
ctgattggtgatccgaagcaggcgatctacgctttccgtggtgcagacatctatacctac
ctgcgcgcgcgtcaggccaccactggccggctgcatacgctgggcaccaacttccgttcc
agccacggcatggtcaacgcggtcaatcatgttttcgcacgcgccgagtcccgagagcag
ggccgcggagcgtttttgttccgcgagaaaaacggcgacaacccggtgccgttcctcccc
gtcgaatctcaaggtcgcaaggaacagctgcaagttgccgggcaagctgtcgcggcgttg
aatgtctggctcttgtccaccgaccagccactgtcaggtgcggtctatcgtcagcagttg
gcggcagcgtgcgccagcgaaatcacctcgctgctcaatggtgggcaaaacgctagcgca
gggttcattcaggacggcaaagatttcagaggcctgaggccgtccgacatcgcgattctc
gtgcgcgatggtaaagaggcccaggccgtacgtggagaactcgccgcccgtggcgtgcgc
agcgtttatctgtcggacaaggattcggtattcgcggcacaagaagcccacgacctgttg
tcctggcttaaggcctgtgccgagccggatgtcgaacgctccctgaaagcggcattggct
tgcatcaccctgaacctgccattggccgaactggaacgtctgaaccaggacgaactggtc
tgggaaacccgggtcatgcagttccgtggctatcgcgagctatggcgcaagcaaggcgtg
ctgccgatgttgcgccgcctgctgcacgacttccatctgccgcaaaccttgatgacgcgc
accgatggcgagcgtgtcctgaccaaccttttgcacctgtcggaattgatgcagcaagca
gcagcggagctggacggtgaacaagcgctgattcgccatctggctgaactgctggcagtg
tctggccaggccggcgaagagcagattctgcgtctggaaagtgatgagcaattggtcaag
gtcgtgaccatccacaagtccaaaggactggaatatccattggtgttcttgccgttcatt
tgttcggcaaaacccgtggatggcagtcgcctgcctctgcattaccacgatgcagagggc
aaggctcaggtgagtttgaaaccaactgccgagttggtagcgcaagcggacgatgagcgg
ttggccgaagacttgcgcttgctctacgttgcgttgactcgggcacaacatgcctgctgg
ttaggcgtgacggatctcaagcggggcaataacaacagctcggtgctgcacctctcggcg
ctgggttatctgcttggtggtggcgcatcgcttggcgagtccagcgaactgaaacgctgg
ctgcaagatctgcaacaggattgcccggctatccatatcgatgaaatgccccaacccact
gacgagcattaccagccgccacgcaatgacgccgtgctgagtgccacactgttgcccaag
cgcaaggccagcgaaaactggtggatcgcctcctacagcgctttgcgcatcagcgatgtg
ttgagtggcggcagcgatgaagcaccagacagcccgcaagcgcaaaagctgtttgatgac
gaacgcctagaccccgatgctccacgggaaatcattgccggcggtgccgatattcaccgc
tttccgcgcggccccaatcccggaacgtttctccacggtttgctggaatgggccggagat
gacggcttcgccgtttcccgcgaggcgctggaggatgcgattgcccgacgctgcaacctg
cgcggttgggagggttggatcaccaccttgagtgactggttgcagcatttgctcaaatcg
ccactgccgattgccggcgggcagccaccggttgtactcgaacaactgaagcagtatcgg
gtcgagatggagttctggttcgccagccataaagtcgatgtagtcaaactcgacgaactg
gtgcgtcagcacacgcacaggggcgtggcccgcgtggcagccgaaccggtgcaactcaat
ggcatgttcaaaggcttcatcgacctgacctttgaacatgatggccgttattacgtggcg
gactacaaatccaactggctcggtgtggatgatcaggcctacaccgagcaggccatggaa
cagtcgatcctcgacaaccgctatgacctgcaatacgtgttgtacctgctggcgttgcat
cgccagctcaaggcgcggctgcctgattacgattacgaccgacatgtcggcggcgcgttg
tatctgttcctgcgtggcacgcgtgctgacagtcgtggtgtgtatttcgcccgtccaccc
cgtgaactgatcgagcgtctcgaccgtatgtttcaaggaaaacctgaacccaagtccgaa
cccgcctgggaacagggagtcctgctatga
DBGET
integrated database retrieval system
