Pseudomonas zeae: HU754_004915
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Entry
HU754_004915 CDS
T07528
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pze
Pseudomonas zeae
Pathway
pze03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HU754_004915 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pze03400
]
HU754_004915 (recD)
Enzymes [BR:
pze01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HU754_004915 (recD)
DNA repair and recombination proteins [BR:
pze03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HU754_004915 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
Helicase_RecD
SH3_13
AAA_22
Viral_helicase1
UvrD-helicase
AAA_16
AAA_17
SLFN-g3_helicase
AAA_25
T2SSE
AAA_28
NTPase_1
ADK
AAA_5
SAS4
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QXI12756
UniProt:
A0A9E6TC69
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All DBs
Position
1140696..1142804
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AA seq
702 aa
AA seq
DB search
MSRTFADLLPTPLAADSLSRLSPLTSAADLLILLTRWVERGWLRALDKAFVAFLHELERD
TDPLVLLAAALTSHQLGHGHVCLDLYETLKAPDFALSLPPEGDVQGGVLLLPSQLLEALD
GAHWCKVLAGSSLVALAADTSDFAQQRPLVLSGKRLYLRRYWTYERRIDTALRQRLQQVE
PTPDDLPQRLNELFGSARTGEVIDWQKLACALATRGAFSIVTGGPGTGKTTTVVRLLALL
QAPAVATGHPLRIRLAAPTGKAAARLTESISQQVQSLKVTEEVRAKIPCDVTTVHRLLGS
RPGTRHFRHHAGNRLPLDVLVVDEASMIDLEMMANLLDALPPHARLVLLGDKDQLASVEA
GAVLGDLCRDAEGGWYSPQTRQWLESVSGESLQGSGLHEDVEGAHPLAQQVVMLRHSRRF
GEASGIGQLARRVNQQLPDEARQLLTAGHYDDVYSLPLKGEQDHKLERLLLEGHGDGPQG
YRHYLSVLRDQRPPSGRPLEHPDWVVWAREVLQAFDTFQLLCAVRKGPWGVEGLNQRITA
ALLKARLIENDQQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPEREGPDAGKPVLRVAFP
RNDGQGGVRFVLPSRLNDVETVYAMTVHKSQGSEFAHTALILPDALNPVLTKELIYTGIT
RAKHWFTLIESRPGVFEEAVQRKVKRLSGLMLELEEGAVLRG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcacctttgccgatttgctccccacgccgttggcagccgacagcctgtcgagg
ctttcgccgctgactagcgccgctgacctgttgatattgctgactcgttgggtcgagcgt
ggttggttacgtgcgctggacaaagcgttcgtcgcgttcctgcacgaacttgagcgtgat
acggatccgctggtgctgctggctgccgccttgaccagccatcaactgggccacggtcat
gtctgtcttgatctgtacgaaaccctgaaggctcctgacttcgcgctgtcgctgcccccc
gaaggcgacgtgcaaggcggtgtgctgttgctgccgtcgcaattgcttgaggcgctcgac
ggtgctcactggtgcaaggttttggccggcagctctttggtcgcgctggcggcggatacc
agcgatttcgcacagcaacgcccgctggtcttgtcgggcaaacgtctgtatctgcgacgc
tactggacctacgaacggcgcattgatacggcgttgcgccagcgcctgcagcaagtcgaa
ccaacaccggacgatctgccgcagcgcttgaacgaactgttcggatcagcgagaacgggt
gaggtgatcgactggcagaaactcgcctgcgcccttgccactcgtggtgcattcagcatc
gtcaccggcggtccggggaccggcaaaaccactacggtcgtacgtttgctggccctgctg
caagcacccgcagtcgctaccggtcatccgctgcggattcgtctggcggcaccgacaggc
aaggccgcggcgcggttgaccgagtccatcagccaacaggtgcagtcgctgaaagtcacc
gaagaggtgcgggcgaagattccttgtgacgtcaccaccgtgcatcgtctgctgggcagc
cgtcccggcacccgccatttccgccaccacgccggcaatcgtttgccactggatgtgctg
gtggtcgacgaagcctcgatgatcgacctggaaatgatggccaatctgctcgatgccttg
ccaccccatgcacgcctggttctgttgggcgacaaggaccaactggcctctgtggaggcc
ggcgctgtgctgggggatttgtgccgtgacgccgagggtggctggtacagcccgcagacc
cgacagtggctggagtcggtcagcggtgagtcgttgcagggcagcggcttgcatgaagac
gtcgaaggcgcccacccgctggcccagcaagtggtcatgctgcgccactcccggcgcttc
ggcgaggccagcgggatcggtcagctcgcgcgtcgggtcaatcaacagttgccggatgaa
gcgcgtcagttgctcaccgccggacactatgacgacgtgtattcgttgccgctcaagggc
gaacaggatcacaagctggagcgcctgctgctggaagggcacggcgacggcccgcagggt
taccgccattatctgagtgtgctgcgtgatcagcgcccaccctcgggtcggcccctcgaa
catccggactgggtcgtttgggcccgcgaagtcttgcaagctttcgacactttccagttg
ctgtgcgccgtgcgcaaagggccatggggtgtcgaaggcctgaatcaacgcattaccgcc
gcattgctcaaagcacgtctgattgaaaacgatcagcaatggtacgaaggccgtccggtt
ctgatgactcgcaacgattacggtctgggcttgatgaacggcgacatcgggatcgctctc
aagctgcccgagcgcgaagggccggacgcgggaaaaccggtattgcgcgtggcgttcccg
cgcaacgacggccagggcggcgtgcgctttgtactgcccagccgcctgaacgacgttgaa
accgtctacgccatgacggtacacaagtcccagggctcggagtttgcccacacggcgctg
atcctgccggatgccttgaacccggtgctgaccaaagaattgatctacaccggcatcacc
cgcgccaagcactggttcaccctgatcgaatcccgcccgggggtgttcgaggaggcagtg
cagcgcaaggtcaaacgcctgagtgggctgatgctggaactggaagagggcgccgtgctt
cgggggtga
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