Pseudomonas zeae: HU754_005365
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Entry
HU754_005365 CDS
T07528
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pze
Pseudomonas zeae
Pathway
pze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HU754_005365 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pze03019
]
HU754_005365 (pnp)
03016 Transfer RNA biogenesis [BR:
pze03016
]
HU754_005365 (pnp)
Enzymes [BR:
pze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HU754_005365 (pnp)
Messenger RNA biogenesis [BR:
pze03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HU754_005365 (pnp)
Transfer RNA biogenesis [BR:
pze03016
]
Prokaryotic type
tRNA degradation factors
HU754_005365 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QXI12841
UniProt:
A0A9E6NRR3
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All DBs
Position
1240455..1242560
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AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQQAASSLDMVV
AGTSDAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPTWNWAPAPEA
TELLGAIRAEFGEAISQAYTITVKADRYARLGELKDQVVAKLSGEEGQPSSSEVKAAFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVSAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaaaaaattccagttcggtcaatcgaccgttaccctcgagactggc
cgtatcgcccgtcaggcctccggcgcagtattggtcaccgttgacgacgacgtcagcgta
ttggtgactgtagtcggcgcaaaacaagccgatccgggcaagggcttcttccctctgtcc
gttcactaccaggaaaagacttacgctgccggtaagatccctggtggtttcttcaagcgt
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccactgttcccagaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtttccacc
agcaagaaaaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatc
tcgggcattccgttcgacggcccgatcggcgccgctcgtgtagctttccacgaaagcacc
ggctacctgctgaacccgacttacgagcagcaagctgcttcgagcctggacatggtcgtt
gccggtacttccgacgccgtactgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgcggtactgtttgctcacgacgaattccaggtggtgatcaacgcggtt
aaagaactggccgctgaagctgccaagccaacctggaactgggctccggcgccagaagcc
accgaactgctgggcgcgatccgtgccgagttcggcgaagcgatctcccaggcttacacc
atcaccgtcaaggccgaccgttacgcgcgtctgggcgagctgaaggatcaagtcgttgcc
aagctgtccggtgaagaaggccagccttcgtccagcgaagtcaaagccgctttcggcgaa
atcgaataccgcaccgttcgcgaaaacatcgttaacggcaagccacgtatcgacggtcgc
gacaccaaaaccgtacgtccgctgaacatcgaagtcggcgttctgccgaagactcacggt
tcggcgctgttcacccgtggtgaaacccaggctctggtcgttgcaacactgggtactgcc
cgtgacgcacaactgctggacaccctggaaggcgagaaaaaagacccgttcatgctgcac
tacaacttccctcctttctcggtgggcgagtgtggtcgcatgggtggcgctggtcgtcgt
gaaatcggtcacggccgtctggcccgtcgttcggtttcggccatgctgccagccgctgac
gtgttcccgtacaccatccgtgtagtttcggaaatcaccgaatccaacggttcgagctcg
atggcttccgtttgcggcgcttccctggccctgatggatgctggtgtgccgatgaaggcg
ccggttgccggtatcgccatgggtctggttaaagaaggcgagaagttcgccgtcctgacc
gacatccttggtgacgaagaccacctgggcgacatggacttcaaagtagccggtaccgcc
aaaggcgttactgcgctgcagatggacatcaagatcaagggcatcaccgaagagatcatg
gaaatcgctctgggccaagccctggaagcgcgcctgaacatcctcggtcagatgaaccag
atcatcggccagtcgcgtaccgaactgtcggccaacgctccgaccatgatcgcgatgaaa
atcgacaccgacaagatccgtgacgttatcggtaaaggtggcgcgaccatccgtgcgatc
tgcgaagaaaccaaggcttcgatcgacatcgaagacgacggttcgatcaagatcttcggc
gaaaccaaggaagcggctgaagcagcacgtcagcgcgttctgggtatcaccgctgaagcc
gagatcggcaagatctacgtcggtaaggttgagcgcatcgtcgacttcggcgcattcgtc
aacatcctgccgggcaaggacggtctggtgcacatctcgatgctgagcgacgctcgcgta
gagaaagtgaccgacatcctgaaagaaggccaggaagtggaagtgctggtactggacgtg
gacaaccgcggccgtatcaaactgtccatcaaagacgtggcagcggccaaggcttcgggc
gtttaa
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