Pseudomonas zeae: HU754_007105
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Entry
HU754_007105 CDS
T07528
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pze
Pseudomonas zeae
Pathway
pze03030
DNA replication
pze03430
Mismatch repair
pze03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HU754_007105 (dnaE)
03430 Mismatch repair
HU754_007105 (dnaE)
03440 Homologous recombination
HU754_007105 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pze03032
]
HU754_007105 (dnaE)
03400 DNA repair and recombination proteins [BR:
pze03400
]
HU754_007105 (dnaE)
Enzymes [BR:
pze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HU754_007105 (dnaE)
DNA replication proteins [BR:
pze03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HU754_007105 (dnaE)
DNA repair and recombination proteins [BR:
pze03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HU754_007105 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
QXI13175
UniProt:
A0A9E6TCV1
LinkDB
All DBs
Position
1627713..1631234
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKALTAMNMPAVAVTDQNNMCSLVKFYKNTMGAG
IKPICGADLWLSNKDPDAPLSRLSLLVMNAKGYRNLTELISRGFIEGQRNGMIIVEREWV
AEANEGLIMLSAAKEGEIGMAMIGGNPAEAEALAREWMAVFPDRFYLEIQRTNRPNDEEQ
LHGAVALADKLGAPLVATNDVRFIKQEDFAAHETRVCIGEGRALDDPRRSKNYSDQQYLK
SAEEMIELFSDIPDAIENTVEIAKRCNIEVKLGTHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWEMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEAGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEPPLDIAFIPLDDKPTYS
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNTSEFKFTVNDDGRIVYGLGAI
KGVGEGPVEAITEARQAGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEQ
KAYQANIDRNRAVLLAAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDADVYASHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTNLAESLRLKLQTQDLKGDQLRWLGDLLKRHRGACPITMEYTSPDAKTL
LQFGETWRIDPADALIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcatctacgcctgcacactgaatactccctggtcgacgggctg
gtgcggatcaagccgctggtcaaggcactgacggccatgaacatgccggcggtcgcagtc
accgaccagaacaacatgtgttccctggtcaaattctataaaaacaccatgggcgcgggc
atcaagccgatctgcggtgccgacctgtggctgtcgaacaaggacccggacgcaccgctg
agccggctcagcctgttggtgatgaacgccaagggctatcgcaacctcaccgagttgatc
tcgcgcggcttcatcgaaggccagcgcaacggaatgatcatcgtcgagcgcgagtgggtt
gctgaagccaacgaaggcctgatcatgctgtccgccgccaaagaaggcgagatcggcatg
gccatgatcggcggcaacccggctgaagctgaagccttggcgcgcgaatggatggcggta
ttcccggatcgtttctatctggaaatccagcgcaccaatcgccctaacgatgaagaacag
ctgcacggtgccgtcgcactcgccgacaagctcggcgcgccgctggtggcgaccaacgat
gtgcgtttcatcaagcaggaagacttcgccgcccacgaaacccgcgtgtgcatcggtgag
ggccgtgccctcgacgatccacggcgctcgaagaattacagcgatcagcaatacctgaaa
agcgccgaggaaatgatcgagctgttcagcgatattcccgacgccatcgaaaacaccgtc
gaaatcgccaagcgctgcaatatcgaagtgaagctgggcactcactttttgcccaacttc
ccgattcccgatggcatgaccatcgacgagtatttccgcaaagtctccttcgacggtctg
gaagaacgcttgtcggtgctgctgcccaaggacaccaccgaagactacgaagccaagcgt
caggtctacgtcgaccggctgaatttcgagctggatatcattatccagatgggtttcccc
ggttacttcctcatcgttatggactttatccagtgggccaagaacaacggcgtgccggta
ggtccgggccgtgggtcgggtgccggttcgttggtggcttatgtacagaagatcaccgac
ctcgatccgctggaatacgacctgctgttcgaacgattccttaacccggaacgggtctcg
atgcccgacttcgacgtcgacttctgcatggacggtcgtgaccgcgtgatcgactacgtg
gccgaaaaatacggtcgtaacgcggtaagccagatcatcactttcggttccatggcggcc
aaggctgtggtgcgcgacgtagcgcgggtgcagggcaagtcctacggcctggcggatcgt
ctgtcgaagatgattccgttcgaagtcggcatgaccctggaaaaagcctacgagcaggaa
gaaatcctccgtgacttcatcaaggttgatgaagaagctgcggaaatctgggaaatggcg
cgcaagctcgaaggcgttgtgcgtaacgttggtaaacacgccggtggtgtggttattgcg
ccgaccaaactgactgacttctcgccaatctactgcgatgaggccggtgacggtctggtg
acccagttcgacaaagacgacgttgaagcggctggtctggtgaagttcgacttcctcggt
ctgcggaccctgacgatcatcgactgggcgctgaaaaccattaaccgcgaccgtgccaag
gtcaacgagccgccactggatatcgcgtttatcccgctggacgacaaaccgacgtactcg
ttgttgcagaaagctgaaaccaccgcggtgttccagcttgaatcgcgcggcatgaaagag
ctgatcaaaaagctcaagcccgactgcctggaagacctgatcgcactggtggccctgttc
cgtccgggcccgctgcagtccggcatggtggacgacttcatcaaccgtaagcacggccgc
gccgaactggcgtatccgcactcggattaccagtacgaaggtttgaagccggttctggca
ccgacttacggcatcatcctgtatcaggaacaggtgatgcagattgctcaggtcatggcc
ggttacacccttggcggtgcggacatgctccgtcgggcgatgggtaagaaaaaacccgag
gaaatggccaagcagcgcggcggtttcattgaaggttgcgcgaccaacaacatcgacgcc
gaccttgccggtaacattttcgacctggtagaaaagttcgccggttacggcttcaacaaa
tcccactccgccgcctacggcctggtctcgtaccagacagcctggctgaaagcccactac
ccggcgccgttcatggctgcggtactgtcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaggaagtgcgcacgatgaaactgcgcctcgacgcgccggacgtgaacact
tcggagttcaagttcacggtgaacgacgacggccgcatcgtctacggcctcggcgcgatc
aaaggtgttggtgaaggcccggttgaggcgatcaccgaggcgcgtcaggcaggtccgttc
aaggatctgttcgacttctgcgcgcgggtcgacctcaagcgcatcaacaaacgtaccctc
gacggcttgatccgcagcggtgcgctagatcgtctggggccgtacttccatgacgaacag
aaggcttatcaggccaacatcgaccgcaaccgcgccgtgctgctggcagcgatggaagag
gcgatcaaggcggccgagcagactgcgcgtacccacgactctggtcacgccgacctgttt
ggcgggctgtttgttgaagaagatgccgacgtttatgcgtcccatcgcaaggccaaggag
ctaaccctcaaggaacgcctcaaaggtgagaaagacaccttgggcctgtacctgaccggt
cacccgattgacgaatacgaaggcgagatccgccgtttcgctcgtcaacgcatcatcgac
ctgaagccggcgcgcgatacgcaaaccgtggcggggatgatcattgccctgcgcgtaatg
aagaacaagaagggcgacaagatgggcttcatcaccctcgacgaccgttcggggcggatt
gaggcgtcgctgtttgccgatgcgttccactctgcgcagtcgttgttgcagaccgacgcg
atggtggtggtcgaaggcgaagtcagcaacgatgacttctccggtggcctgcgcctgcgc
gtcaagcgggtgatgagcatggaagacgcgcgcaccaatctggccgaaagcctgcgcctg
aagctgcaaacccaggatctgaaaggcgatcagctacgctggttgggggatttgctcaag
cgtcatcgcggcgcgtgcccgatcaccatggagtacaccagtccggatgcgaagaccttg
ctgcagttcggcgagacctggcggattgatccggcggatgcgttgattcaagccctgcgt
gaccagttcgggcgagacaacgtcttcctccaataccgttga
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integrated database retrieval system
