KEGG   Pseudomonas zeae: HU754_007545
Entry
HU754_007545      CDS       T07528                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pze  Pseudomonas zeae
Brite
KEGG Orthology (KO) [BR:pze00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pze03400]
    HU754_007545
Enzymes [BR:pze01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HU754_007545
    5.6.2.6  RNA 3'-5' helicase
     HU754_007545
DNA repair and recombination proteins [BR:pze03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HU754_007545
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QXI13258
UniProt: A0A9E6NS23
LinkDB
Position
complement(1711047..1713536)
AA seq 829 aa
MAKSSDLAKIWFSARNWKPFAFQKQVWAAVKNGQSGLLHASTGAGKTYAVWFAALNRFAK
PAAVVESPRKRKPPAEPLTVLWITPMRALAADTARALQTPVDDLHIPWSIGLRTGDTSSS
ERARQSRRLPTTLITTPESLTLLLARTDAQVALASLRMIVVDEWHELLGNKRGVQLQLAL
ARLRHWQPELIVWGVSATLGNQSHAEQVLIPQGGGISIQGQNEKALKVDTLLPPAIERFP
WAGHIGLKMLPQVVAELEACASTLVFTNTRAQSEIWYQALLEARPDWAGLIALHHSSLSR
ETRDWVEQALKDGHLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPG
RTSRVTLVPTHSLELIEAAAARDAVERRRIEPRQSPHKPLDVLVQHLVSMALGGGFLPDE
LYEEVRGAWAYRDLTTADWAWALAFVRHGGMSLTAYPDYRRVEPDEHGVWRVPDARLARR
HRMSIGTIVSDASIHLKFWSKGGGGKQLGSVEEGFIARLKPGDGFLFAGRLLELVRVENM
TAYVKRSNAKKAAVPRWNGGRMPLSNELAAAVVSRFSAAAQGEFVGPEMHALRPLLETQM
RWSGLPTTENLLAEVLKSREGWHLFLYPFAGRQVHLGLASLLAWRVSQQQPVTFSIAVND
YGLELLSATPIDWAEYLNADLFNADDLLADVLASLNAGELALRRFREIARIAGLVFAGYP
GAPKSTRQVQASSGLFFEVFKQYDADNLLLAQAGEEVLREELDIRRLEQTLERINGMKLD
LHQVKRPTPLGFPLLVERMRESMSSEKLADRIRRMVGDLENSADKDKSS
NT seq 2490 nt   +upstreamnt  +downstreamnt
atggcgaaatcctccgacctggcaaaaatctggttcagcgcccgcaactggaagccgttc
gcctttcagaaacaggtctgggcggcggtcaaaaacggccaatccggtctgctccacgcc
agcaccggtgccggcaaaacctatgcggtgtggtttgccgcgctcaatcgcttcgccaaa
cccgccgctgttgttgaaagcccacgcaagcgcaaaccaccggccgaaccactgaccgtg
ctgtggatcacccccatgcgcgccctcgccgccgacactgcgcgcgccctgcaaacaccg
gtcgatgacctgcacatcccatggagcatcggcctgcgcaccggcgataccagcagcagc
gaacgcgcccggcagagccggcgcctgccgaccacgctgatcaccaccccggaaagcctg
accttactgcttgctcgtaccgatgcgcaggtggcgctggcgagtctgcgcatgatcgtc
gtcgatgaatggcacgaactgctcggtaacaagcgcggcgtgcaactgcaactggccctc
gcccgcctgcggcattggcaacccgaactgatcgtctggggggtgtccgccactctcggt
aatcaatcccacgccgaacaggtgctgatcccacagggcggcggcatcagcattcagggg
caaaacgaaaaagcgctgaaggtcgacaccctcctcccaccggcgattgaacgttttccg
tgggccggacacatcggcctgaagatgctgccgcaagtggtcgccgaactggaggcctgc
gccagcactttggtgttcaccaatacccgggcgcaatcggaaatctggtatcaggcactg
ctggaggcgcgacccgattgggccgggttgatcgctttgcatcacagttcactgtctcgc
gagactcgcgactgggtcgagcaggccttgaaagacgggcacctcaaagccgtggtctgc
acctcgagcctggatctgggcgtggatttcctgccagtcgagcgcgtgctgcaaatcggc
tcggccaaaggcgtcgcgcgcctgatgcaacgcgccggtcgttcaggccacgcgccggga
cgcacctcgcgagtaacgctggtgccgactcacagccttgagctgatcgaagccgctgcc
gcccgtgatgccgtcgaacgacggcgtatcgaaccacgccagtcaccgcacaaaccgctg
gatgtgctggtccagcatttggtcagcatggccctcggtggtggatttttacccgatgag
ctgtacgaagaagtccgtggcgcctgggcttatcgtgacctgacaactgctgactgggcc
tgggcgctggctttcgtacgccatggcgggatgtctctgacagcctatccggattaccgc
cgggtcgagccagacgagcacggcgtctggcgagtgccggatgcgcgattggcgcggcgc
catcgcatgagcatcggcaccatcgtcagtgacgcgagcatccatctgaaattctggagc
aagggcggcggtggcaaacagttgggcagtgtcgaggaaggtttcatcgcgcggcttaaa
ccgggtgacggttttctcttcgccgggcgtttgctggagttggtgcgagtggaaaacatg
accgcttacgtcaaacgcagcaacgcgaaaaaagccgccgtgccgcgctggaatggcggg
cgcatgccgctttccaatgaactcgccgccgccgtcgtcagtcgtttcagcgcggccgcg
cagggtgagtttgtcgggccggaaatgcacgcattgcggccgttactggaaacgcagatg
cgctggtctggactgcccaccaccgaaaacctattggccgaggtgctgaagtcccgcgaa
ggctggcaccttttcctctatccctttgccgggcgccaggtgcacctgggactggcgagc
ctgttggcatggcgcgtcagtcaacagcagcctgtgacgttttccatcgcggtgaacgat
tacggcctggaattgctcagcgccacgccgatcgactgggccgagtatttgaatgccgat
ctcttcaatgccgatgatttattagcggacgttctggccagtctgaacgcaggcgaactg
gccttgcgccgttttcgcgagatcgcgcggattgccggactggtcttcgccggctacccc
ggcgcaccgaaaagcacccgacaggtgcaggcgtccagcggactgttttttgaagtgttc
aaacaatacgacgcagataatctgttgctggcccaggccggggaagaagtcctgcgagaa
gaactggatattcgtcgcttggaacagacattggagcggatcaacgggatgaaactggac
ttgcatcaggttaaacgtcctacaccactgggcttcccgctgctggtggagcgcatgcgc
gaaagcatgagttcggaaaaactcgctgatcgcatcaggcgaatggttggtgatctggag
aacagcgccgacaaggataaatcctcatga

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