Pseudomonas zeae: HU754_007805
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Entry
HU754_007805 CDS
T07528
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pze
Pseudomonas zeae
Brite
KEGG Orthology (KO) [BR:
pze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pze03021
]
HU754_007805 (rapA)
Transcription machinery [BR:
pze03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HU754_007805 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QXI13308
UniProt:
A0A9E6NSD6
LinkDB
All DBs
Position
complement(1765404..1768250)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGETRQYALRNAPLTRVRFSPG
DSITHFEGWKMTVQQVDDVDGLMVYHGLNGQNEAVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYNTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
TNPFEDTQLALVALEWLVDDEKAQDALFAAGWDLLVVDEAHHLVWHEEKASAEYSLVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESENYRPVAEAVQELLDK
GRLSAKAHKTIQGFLGNEGEALLTAVNDGDSEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHPYPLPCPDEYLELPLGEHAELYPEVSFQAQPDASEEERWWKFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVLFDLPSHPDLLEQRIGRLDRIGQKHIIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLEEADDSEWQALIDEARTERERLE
AELHTGRDRLLELNSGGAGEGEALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLSARVSF
ETLNDQLESVPRASANKFIQAQRDQLTPRINAGEDKIAPRHAERVAEARRRLAADTDEEL
ARLTALQAVNPTVRDSELDALRTQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagtgacagcgaagcagagcttggt
ttaggcaccgttctggcacaggacggccgcttgttgaccgtgctttacccggccactggc
gaaacccgccagtacgcgctacggaatgcgcccctgacccgcgtgcggttctcgccgggt
gacagcatcacccacttcgaaggctggaaaatgaccgtgcagcaagtcgacgacgtcgac
gggctgatggtctatcacggtctcaacgggcagaacgaagccgtcaccctgccggaaacc
cagctgtcgaacttcattcagttccgtctggccagcgaccgtctgttcgccggccagatc
gatccgctggcgtggttctcgctgcgttacaacaccctcgaacacaccagccgccagctg
caatcgtcgctctggggcctgggtggcgttcgcgctcagccaatcgcgcaccaattgcac
attgctcgcgaagtcgccgaccgtatcgcgccgcgcgtattgctggcggacgaagtgggt
ctgggtaaaaccatcgaagccggtctggtgatccatcgccaactgctctcgggccgcgcc
aaccgcgtgctgatcctcgtcccggaaaacctccagcaccagtggctggttgaaatgcgc
cgccgcttcaacctgcaagttgcgctgttcgacgaagagcgtttcatcgaaagcgatgcc
accaacccgttcgaagacacccaactggcgctggttgcgctggagtggctggtcgacgac
gagaaggcccaggacgcactgttcgcggccggttgggatttgctggtggtcgacgaagcg
caccacctggtctggcacgaagagaaagccagcgcggaatattcgctggtcgagcaactc
gccgaagtcattccgggcgtgctgctgctcaccgccaccccggaacaactcggccaggac
agccacttcgcccgtctgcgcctgctcgacccgaaccgtttccatgacctggctgccttc
cgcgccgagagcgagaactatcgcccggtggccgaagccgtgcaggaactgctcgacaag
ggccgtctctcggccaaagcgcacaaaaccattcagggtttcctcggcaacgaaggcgaa
gccttgctgaccgcggtcaacgatggcgacagcgaagccagcgcgcgcctcgtgcgtgaa
ctgctcgatcgccacggcaccggccgcgtgctgttccgtaatacccgcgccgccgtgcag
ggtttcccggagcgcaaactgcacccgtacccgctgccatgcccggacgaatacctcgaa
ctgccgctgggcgaacacgccgagctgtacccggaagtcagcttccaggcccagccggac
gccagcgaagaagaacgctggtggaaattcgacccgcgcgtcgaatggctgatcgatcag
ctgaaaatgctcaagcgcaccaaagtgctggtgatctgcgcccacgccgaaaccgcgatg
gacctggaagacgccttgcgcgtgcgttccggcatcccggccacggtgttccatgaaggc
atgaacatccttgagcgtgaccgcgccgccgcctacttcgccgacgaagaattcggcgca
caagtgctgatctgctcggaaatcggcagtgaaggtcgcaacttccagttcgcgcaccac
ctggtgctgttcgatctgccgtcgcacccggacctgctcgagcagcgtatcggtcgtctc
gaccggatcggccagaaacacatcatcgaactgcacgtgccgtacctggaaaccagcccg
caagagcgcctgttccagtggtaccacgaagcgctcaacgcgttcctcaacacctgcccg
actggcaacgccttgcagcaccagttcggcccgcgcctgctgccgctgctcgaagaagcc
gacgacagcgagtggcaagcgctgatcgacgaagcacgcaccgagcgcgagcgtctggaa
gccgagctgcacaccggtcgcgaccgtctgctggagctgaactccggcggtgcgggcgaa
ggtgaagcgctggtcgaggcgatccttgagcaagacgatcagtttgccctgccgatctac
atggaaaccctgttcgacgcgttcggcatcgacagcgaagaccattcggaaaacgccctt
atcctcaagccgagcgaaaaaatgctcgacgccagtttcccgctgggcgacgacgaaggc
gtgaccatcacctacgaccgcaaccaggcgctctcgcgcgaagacatgcagttcatcact
tgggaacacccgatggtgcagggtggcatggatctggtgctgtccggttcgatgggcaac
accgctgtcgcgttgatcaagaacaaggcgttgaaaccgggcaccgtgctgctggaactg
ctctacgtcagcgaagtggtcgcgccgcgttcgctgcaactgggtcgttacctgccgccg
gccgccctgcgctgcctgctcgacgccaacggcaacgacctctcggctcgcgtctcgttt
gaaaccctgaacgatcagctggaaagcgtgccgcgtgccagcgccaacaagttcatccag
gcccagcgcgatcagttgacgccacggatcaacgccggtgaagacaagattgctccgcgt
cacgccgagcgcgtggccgaggcccgccgccgtctggccgccgacaccgacgaagaactg
gcgcgcctgaccgcgttgcaagcggtcaacccgaccgtacgtgacagcgaactggatgcg
ttgcgcacgcaacgtgagcagggtctggcgatgctggataaagcggcgttgcgactggaa
gcgattcgggtgttggtggcgggttaa
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