Pseudomonas zeae: HU754_008690
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Entry
HU754_008690 CDS
T07528
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pze
Pseudomonas zeae
Brite
KEGG Orthology (KO) [BR:
pze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pze03009
]
HU754_008690
Enzymes [BR:
pze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HU754_008690
Ribosome biogenesis [BR:
pze03009
]
Prokaryotic type
rRNA helicases
HU754_008690
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QXI13478
UniProt:
A0A9E6TD88
LinkDB
All DBs
Position
1956961..1958301
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AA seq
446 aa
AA seq
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MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILN
RLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK
VPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECPNRQQTM
LFSATTGGSGLREMIGKVLNNPEHLQLNAVSQLNSTTRQQIITADHNQHKEQIVNWLLAN
ETYQKAIVFTNTRAMADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKQGGVKILVAT
DVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIER
YLKQSFERRTIKEVKGTYGGPKKVKASGKAVGVKKKKTDAKGDKKKTAAKTPTKRKSVNR
PKPDSLVSSDGMAPLKRRKPAEPAAE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgcttaaagctgtggccgagctgaaattt
gtcgagccaacgcctgtgcaagccgcggccatcccgctggcgctccaagggcgtgatctg
cgggtgacggcgcaaaccggtagcggcaaaaccgccgctttcgtactgccaatcctcaat
cgcctgatcggcccggccaaggttcgcgtcagcatcaagacgctgatcctgctgccgact
cgcgagctggcccagcagacgctgaaggaagttgaacgcttttcgcagttcactttcatc
aagtccggcctgatcactggcggtgaagacttcaaggtccaggcggcgatgctgcgcaaa
gtgccggacatcctcatcggcaccccgggccggatgatcgagcaactcaacgccggcaac
ctcgacctcaaagaagtcgaagtgctggtgctcgacgaagccgaccgcatgctcgacatg
ggcttcgccgaagacgtgcagcgtctggtcgatgaatgcccgaaccgtcagcagaccatg
ctgttctccgccaccaccggcggttctggcctgcgcgagatgatcggcaaggtgctgaac
aaccctgagcacttgcagctcaacgcggtcagccagctgaactcgacaacccgtcagcag
atcatcaccgccgaccacaatcagcacaaagagcagattgtgaactggctgctggccaac
gagacctatcagaaggccatcgtcttcaccaacacccgcgccatggccgaccgcatttac
ggccgcctcgtggctcaggaatacaaagcgttcgtgctgcacggcgagaaagaccagaag
gatcgcaaactggcgatcgaccgtctgaagcagggcggcgtgaagattctggtcgcgacc
gacgtcgcggcccgtggtctggacgttgatggcctggatctggtgatcaacttcgacatg
ccacgcagcggcgacgaatacgtgcaccgcatcggccgtaccggtcgtgccggcaacgac
ggtctggcgatctcgctgatctgccacggcgactggaacctgatgtcgagcatcgagcgc
tacctgaagcagagcttcgagcgccgcaccatcaaggaagtcaaaggcacctacggcgga
ccgaaaaaggtcaaggcctcgggcaaagccgttggtgtgaagaagaaaaagaccgacgcc
aagggtgacaagaagaaaactgccgccaagacgccgaccaagcgcaagagcgtcaatcgt
ccgaagcctgactcgttggtgagcagcgacggcatggcaccgctcaagcgtcgcaagcca
gcagagcctgcggctgagtaa
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