Pseudomonas zeae: HU754_013405
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Entry
HU754_013405 CDS
T07528
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pze
Pseudomonas zeae
Brite
KEGG Orthology (KO) [BR:
pze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pze03032
]
HU754_013405
03400 DNA repair and recombination proteins [BR:
pze03400
]
HU754_013405
Enzymes [BR:
pze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HU754_013405
DNA replication proteins [BR:
pze03032
]
Prokaryotic type
DNA Topoisomerases
HU754_013405
DNA repair and recombination proteins [BR:
pze03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HU754_013405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QXI14370
UniProt:
A0A9E6NU98
LinkDB
All DBs
Position
complement(3066936..3067973)
Genome browser
AA seq
345 aa
AA seq
DB search
MPDTVLTADLPSDLHYVDDTQPGITRKKLRGKFSYFEPSGQRISDPDEIKRINALAVPPA
YTDVWICPDPRGHLQATGRDARGRKQYRYHARWREVRDADKYSRLREFGLALPKLRKQLE
ALLAAPGFSRDKVMATVITLLDATLIRVGNTQYARDNRSYGLTTLRSRHVEVNGSAILFQ
FRGKSGIEHQITVKDRRLARIIKRCLEIPGQNLFQYLDENGERHTVSSSDVNAYLQTLTG
ADFTAKDYRTWAGSALALAVLRELQWESETEAKRHVVEMVKGVAKQLGNTPAVCRKCYIH
PAVVEKFMLGALAELPRPRVRKGLRAEEVALAMFLERMSEMTDAS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacaccgtgctgactgccgacctgccatccgacctgcattacgtcgacgacacc
cagcccggtatcacccgcaagaagctgcgtggcaagttcagctatttcgagccgtccggc
cagcgcatcagtgatccggatgaaatcaaacgcatcaatgcccttgccgtaccacccgcc
tataccgatgtgtggatctgtccggatccgcgcggtcatctgcaagccaccggccgtgat
gcccgtggccgcaagcaatatcgctatcacgcgcgctggcgcgaagtgcgcgatgccgac
aagtattcgcgcctgcgtgagttcggtctcgcgttgccgaaactgcgcaagcaactggag
gcgctattggccgcgcccggcttcagtcgtgacaaggtcatggcgacggtgatcaccctg
ctcgacgccacattgatccgggtcggcaatacgcaatacgcccgcgacaaccgttcctac
ggcctgaccaccctgcgcagccgacatgtcgaagtcaacggcagcgcgatcctcttccag
tttcgcggcaaaagcggcatcgaacaccagatcaccgtcaaggatcggcgtctggcgcgc
atcatcaagcgttgcctggagattcccgggcagaacctgtttcagtatctggatgaaaac
ggtgagcgacacaccgtcagttcttccgacgtcaacgcctacctgcaaaccctgaccggc
gccgatttcaccgccaaggattaccgtacctgggccggcagtgccttggcgctggcggtg
ttgcgcgagttgcaatgggaatccgagaccgaggccaagcggcatgtggtggagatggtc
aaaggcgtcgccaagcagctgggcaacaccccggcggtgtgccgaaaatgctacatccac
cccgccgtggtggagaaattcatgctcggcgccctcgctgaactgcctcgcccgcgcgtg
cgcaaaggcctgcgtgcggaggaagtggcactggcgatgtttctcgagcgaatgagcgag
atgaccgatgcatcttga
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