Pseudomonas zeae: HU754_014075
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Entry
HU754_014075 CDS
T07528
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pze
Pseudomonas zeae
Pathway
pze03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HU754_014075
09124 Replication and repair
03420 Nucleotide excision repair
HU754_014075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pze03021
]
HU754_014075
03036 Chromosome and associated proteins [BR:
pze03036
]
HU754_014075
03400 DNA repair and recombination proteins [BR:
pze03400
]
HU754_014075
Enzymes [BR:
pze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HU754_014075
Transcription machinery [BR:
pze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HU754_014075
Chromosome and associated proteins [BR:
pze03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HU754_014075
DNA repair and recombination proteins [BR:
pze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HU754_014075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Helicase_C
Maf_flag10_N
Motif
Other DBs
NCBI-ProteinID:
QXI14490
UniProt:
A0A9E6NUI6
LinkDB
All DBs
Position
3230522..3232840
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AA seq
772 aa
AA seq
DB search
MSYSIAVRALCEFTAKAGDLDLRFTPSPTALEGIAGHRTVASRRSEKYQSEVALEGEFLQ
LKVKGRADGYDPAQTCLEEVKTYRGDLSKQPANHRQLHWAQAKIYGWLMCRKLELEQINL
ALVYFDIVSEKESCLVEAFSAETLKAFFEQQCTLFLQWAEQEMAHREARNLAAQQLAFPH
ADFRPGQRHLAESVFKAVSTGRCLMAQAPTGIGKTLGTLFPMLKALAPQQLDKVFFLTAK
TPGRKLALDASQVLFDRSPALPLRVLEMVARDKACEHPDKACHGESCPLAQGFYDRLPAA
REAASRIRLLDQAAMREVAAQHAVCPYYLSQEMARWVDVVIADYNYYFDFSAMLFGLAQL
NQWKVAVLADEAHNLVERGRQMYSASLDQFTLGSVRKTAPAPLKSSLQRINREWNALHAP
QLAAYQAYDKAPEKLLQAISLCCAAIGDYLNDHPQGLDSALQNFYFDLLQFARVAELYDE
HYLFDISKRDLDRKKPLSQLCLRNVVPAAFIGPRLKAARSSVLFSATLSPRHYYADLLGT
PADTVWIDVESPFCAEQLQVQIVSRISTRFNHRQASLEPIVELIARQFSERPGNYLAFFS
SFDYLQQVASLLAERYPHISLWQQSRGMLEGARQAFLDQFTAHSQGVGFAVLGGAFGEGI
DLPGARLIGAFIATLGLAQFNPVNEQLKHRMAAIFGAGYDYTYLYPGVQKVVQAAGRVIR
TREDSGVVMLIDDRFAESRIKQLLPRWWAINHETDASQFAGLPHTSAHDNGW
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
ttgagttacagcattgccgtgcgcgcactctgtgagttcaccgccaaggccggcgacctt
gacctgcgttttacgccatcacccacggcgctggaaggcatcgccggccaccgcactgtg
gcctcgcggcgcagcgaaaagtatcaaagcgaagtggcgctcgaaggcgagtttctgcag
ttgaaggtcaagggcagggcggacggctacgacccggcgcagacttgccttgaagaggtt
aaaacctaccgtggcgacctgagtaagcaaccggccaatcaccgccagttgcactgggca
caggcgaagatctacggctggttgatgtgccgcaaactcgaacttgagcaaatcaatctg
gcgctggtgtatttcgatatcgtcagcgaaaaagagtcctgtctggtcgaggccttcagc
gccgagaccctcaaggcctttttcgaacagcaatgcacgctgttcctgcaatgggccgaa
caggaaatggcccatcgagaagcgcgcaatctggccgcgcagcaactggcgtttccccat
gccgattttcgtcccggtcagcggcacttggcggaatcagtgttcaaagccgtcagcacc
ggccgttgcctgatggcccaggcaccgaccggcatcggcaaaaccctcggcacgctgttc
ccgatgctcaaggccctggcgccgcagcaactggacaaggtgttcttcctgaccgcgaag
acaccggggcgcaaactggcgctggatgccagtcaggtgttgttcgatcggtcaccagcc
ttgcccctgcgggtgctggaaatggtcgcccgggacaaggcctgcgaacatccggacaaa
gcctgtcacggcgaatcctgcccgttggctcagggcttttatgatcgtttgccggccgcg
cgggaagcggccagtcgaatccgcctgctcgaccaagccgccatgcgcgaggtcgccgcg
caacacgcggtgtgcccgtattacctgagtcaggagatggcccgttgggtagacgtggtg
atcgccgactacaactattacttcgacttcagcgccatgctgttcggtctggcccagctt
aatcaatggaaagtcgcggtgctggcggacgaggcgcacaacctggtcgaacgcggccgg
caaatgtacagcgccagtcttgatcaattcacccttggcagtgtgcgcaaaaccgcgccg
gcaccgctgaaaagctccctgcaacggatcaaccgtgaatggaacgcgctgcatgcgccg
caactggcggcgtatcaggcttacgacaaggccccggaaaaactcctgcaagcgatctcg
ttgtgttgcgcggccattggcgattacctcaatgaccatccgcagggcctcgacagcgcc
ttgcagaacttctatttcgacctgttgcaattcgcccgggtggcggagctgtacgacgag
cattacctgttcgacatcagcaagcgcgacctcgaccgcaaaaagccgctgtcgcagtta
tgcctgcgcaacgtggtgccggccgcgttcattggcccgcggctgaaagcggcgcgcagc
agcgtgttgttttccgcgaccctcagcccgcgtcactattacgccgatttgctcggtacg
ccggccgacaccgtgtggatcgacgtcgaatcgccgttttgcgccgagcagttgcaggtg
cagatcgtcagccgcatttcgacacgcttcaaccatcgtcaggcctcgctggagccgatc
gtcgaattgatcgcgcggcagttcagcgaacgtccgggcaactatctggcgtttttcagc
agcttcgattatctgcaacaagtggcgtcgttactcgctgagcgttacccgcacatcagc
ctgtggcagcaatcgcggggcatgctcgaaggggcgcggcaggcctttctcgatcagttc
accgcgcacagccagggcgtcggctttgccgtgttgggcggtgcgttcggcgaaggcatc
gatttacccggtgcgcggctgatcggcgcgttcattgccaccctggggctggcgcagttc
aatccggtcaacgaacaactcaaacaccgcatggccgccatcttcggcgccggttacgac
tacacctacctgtacccgggcgtgcagaaagtggtgcaggccgccgggcgagtcatccgc
acccgtgaggatagcggcgtggtgatgctgattgacgatcgctttgccgagagccggatc
aaacagctgctgccgcgctggtgggcaatcaatcacgagacggacgcttcccaatttgcc
ggattaccgcatacttctgctcatgacaatggctggtga
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