Pseudomonas zeae: HU754_019275
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Entry
HU754_019275 CDS
T07528
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
pze
Pseudomonas zeae
Brite
KEGG Orthology (KO) [BR:
pze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pze03000
]
HU754_019275 (rtcR)
Transcription factors [BR:
pze03000
]
Prokaryotic type
Other transcription factors
Others
HU754_019275 (rtcR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA
AAA_16
AAA_22
NACHT
AAA_30
MCM
AAA_2
AAA_19
AAA_7
ABC_tran
ATPase_2
bpMoxR
BrxC_BrxD
AAA_14
AAA_33
IstB_IS21
TniB
Methyltransf_32
ResIII
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QXI09964
UniProt:
A0A9E6NL48
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Position
4399888..4401486
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AA seq
532 aa
AA seq
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MQNRRTVAIGFIGATLDRVGKGANRWSHWRPSVGLCQQADVLINRLELIHGIDARDVSLA
ERVRADIQQVSPETEVRLHSMALRNPWDFEEVYGALHDFTTAYAFDTEHEDYLVHITTGT
HVAQICWFLLTEARYLPARLIQTSPAKRKSEDEHACGTHALIDLDLSRYDRIASRFANKR
LEGLAFLKSGIATRNAAFNRSIEQIERVAVRSKAPMLLIGPTGAGKSFLARRIYELKRNR
HQMQGRFVEVNCATLRGDGAMSTLFGHSKGAFTGAQNARDGLLRAADGGMLFLDEIGELG
ADEQAMLLKAIEEKRFFPLGSDKEVESDFLIIAGTHRDLRSRVAEGLFREDLYARINLWT
FDLPGLAGRREDIEPNIDFELQRHAREHGQLVRFNLEARRRYLAFASSSEAAWLGNFREL
SASITRMATLADSGRIDEAQVQEEIERLRYAWGLTQAGSNSEDLPGNEESMDLFDRLQLR
AVLEVCRQADSLSDAGRRLFGISRLAKAQPNDADRLRKYLARFGIEWSQLSP
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatagacgtaccgtcgccatcggttttatcggagccacccttgatcgcgtcggt
aaaggcgccaatcgctggagccattggcgcccgagcgtgggcctctgccagcaggcggat
gtgctgatcaatcggcttgagctgattcacggcatcgacgcccgcgacgtcagtctcgcc
gagcgggtgcgcgccgacattcagcaggtgtcaccggaaaccgaagtgcgcctgcactcg
atggcgttgcgcaatccgtgggattttgaagaggtctacggcgcgctgcacgatttcacc
actgcctacgcgttcgacaccgaacacgaggactacctcgtccacatcaccaccggcacc
cacgtcgcgcagatctgctggtttctgttgaccgaggcgcgctacttgcccgctcgcctg
atccagacctcccccgccaagcgcaagagcgaagacgaacacgcctgcggcacccacgcc
ctgatcgacctcgacctgtcgcgatacgatcgcatcgcctcacgcttcgccaataaacgc
ctggaaggtctggcatttctgaagtccggcatcgccacacgcaatgccgcgttcaatcgc
tccatcgagcagatcgaacgcgttgcggtacgctcgaaagcccccatgttgctgatcggc
ccgaccggtgccggcaaatcctttctggctcgacgcatctacgaactcaaacgcaaccgc
catcagatgcaggggcgctttgttgaagtcaactgcgccaccctgcgtggcgacggtgcg
atgtcgaccttgttcggccacagcaaaggcgccttcaccggcgcacagaacgcccgcgac
ggtctgctgcgtgcggccgatggcggcatgctgttcctcgatgaaatcggcgaactgggc
gccgacgagcaggcgatgctactcaaagcgattgaagaaaaacgcttctttccactgggt
tctgacaaggaggtggagagcgacttcctgatcatcgccggcacccatcgcgacctgcgc
agccgggtcgctgaaggcctgtttcgcgaagacttgtacgcacgcatcaacctctggacg
ttcgaccttcccggcctcgccggccgccgcgaggatatcgagccgaatattgatttcgag
ttgcagcgacatgcccgtgagcatgggcaattggtgcgcttcaaccttgaagcacgccgc
cgctatctggccttcgccagctctagcgaagcggcgtggctgggcaatttccgcgaactg
tctgcgtcgatcacgcgcatggcgacattggcggatagcgggagaattgatgaggcgcag
gtgcaggaagagattgagcggttgcgttatgcctggggcctgacccaagcgggaagcaac
tcagaagatttgccagggaatgaagagagcatggatctgtttgaccgcttgcagttgcgg
gcagtgctcgaggtctgccggcaagcagacagcctgtcagatgccggtcgccgcttgttt
ggcatctcgcgcctggccaaggcgcagcctaatgatgcggaccgcttgcgcaagtacctg
gcccggttcgggattgaatggagccagttgtcgccgtag
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