Pseudomonas zeae: HU754_026885 Help Entry HU754_026885      CDS       T07528                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism pze  Pseudomonas zeae Brite KEGG Orthology (KO) [BR:pze00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pze03400]     HU754_026885 Enzymes [BR:pze01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      HU754_026885     5.6.2.6  RNA 3'-5' helicase      HU754_026885 DNA repair and recombination proteins [BR:pze03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     HU754_026885 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc DEAD WHD_4th_Lhr WHD_Lhr WHD_3rd_Lhr Helicase_C ResIII Cas3-like_C_2 HTH_IclR AAA_22 GntR Motif Other DBs NCBI-ProteinID:  QXI11368 UniProt:  A0A9E6NNG5 LinkDB All DBs Position 6104204..6108490 Genome browser AA seq 1428 aa AA seqDB search MNLPIPTDAALAGFHPAVSAWFSNTFATVTAAQARAWPLIRQRRSTLIAAPTGSGKTLTA FLAVLDDLVHRGLEDPDGLPDETLVVYVSPLKALSNDIRINLQNPLAGITQHLRQMNLPG LAITTAVRTGDTSQKERAAMRKTAPHILVTTPESLYVLLGSESGRKMLGTTRTVIIDEIH AMAAGKRGSHLALSLERLQALCGEPLTRIGLSATQKPVEAVAQFLVGHERPCEIIDIGHA RPRDLGIEVPPVPLSAVMANDVWELVYDRLAELAREHRTTLIFVNTRRLAERLSRHLSER LGKHAVAAHHGSLAKEFRLDAEQRLKRGELQVLIATASLELGIDIGEVDLVCQIASPRSI AGFLQRVGRSGHQVGGTPKGRLFATTRDDLIECTALLDCVRRGELDTLHIPVAPLDVLAQ QIIAEVSCQEWPEDALLAMFRRASPYRDLDEKHYQALLSMLAEGYNGRQGIRSAYLHRDA VSRTLRGRRGSQLTAVTSGGTIPDNADYSVMLEPHGLNIGSVNEDFAVESIAGDVFQLGN TSYRILRVETGKVRVEDAHGQPPTIPFWLGEAPGRSDELSSAVARLQAQLDELLSASPGN LQPALDWLTQTLGLNRASAEQLVEYLARARQTLGALPSQDTLLMERFFDESGGTQLIIHS PFGSRINRAWGLALRKRFCRTFNFELQAAASEDAIVLSLSTSHSFELDDVWRYLHSNSAE HILIQAVLDAPLFGVRWRWNAGVALALPRFTGGRKVAPQLQRMKSEDLIASVFPDQIACL ENLAGEREIPEHPLIEQTLDDCLHEAMDSEGWLNLLRRMERGDVRLISRDLPAPSPLAAE ILSARPYTFLDDAPLEERRTQAVINRRWSDPQSTDDLGALDADAIAAVHEEAWPTPNAVD EMHEALMSLACISDEEVQTNEGWRAWLENLASSGRACRLQIDAEHGLWLARERLTCLQAL YPQAKLQAELEALPGFDEAWTFDEALVEVIRARLGAFGPLPLSAIAEPLALQATEVHQAL AQLEREGYVLRGQFTPKVNIEEWCERHLLARIHRYTVKRLRREIEPVALQDFMRFLFDWQ HLSPTTRGQGSAVLPAIVGQFEGYPAAASAWDSDILPARLKDYSPSWLDDLCRNGKLVWT RLSARQKVSGTALRSTPIVLLPRSQVGLWSALAEQTPVSELSPKTQKVFEALSQHGALFF DELSHEAHLLRTELEIALQELVGAGLVNADSFAGLRALITPPSKRQQRSSRRGRGAFVGG MDDAGRWALLRRGTAVDNSETLEHVAMTLLRRYGVVFWRLLEREADWLPSWRELLRTFHR LEARGEIRGGRFVSGLAGEQFALPEAIPLLREVRRRPHDGSLVAVCGVDPLNLAGTLLPG TKVPALVSNRLVYRDGIPAAAEIAGKQQFWLELDQIDMEQVRGKLIRH NT seq 4287 nt NT seq  +upstreamnt  +downstreamnt atgaatctgcccatccccacggacgcggccctggcaggctttcaccccgccgtcagtgcc tggttcagcaacacattcgcgacggtcaccgccgctcaggcccgcgcatggccgttgatc cgccagcgccgttcgacgctgatcgctgcgcccaccggctccggcaaaaccctcactgcg tttctggccgtgctcgacgacctcgtccaccgaggtcttgaagatcccgacggcctgccc gacgaaaccctggtggtctacgtctcgccactgaaggcgctttccaacgacattcgcatc aacctgcaaaacccattggcggggatcacccaacacctgcggcagatgaatctgcctggg ctggcaatcaccaccgccgtgcgcactggcgacacctcgcaaaaagaacgcgcggccatg cgcaagaccgcgccgcacattctggtgaccaccccggaatcgctctacgtgctgctcggt tcggaatcgggacgaaaaatgctcggcaccacgcgcacggtgatcatcgatgaaatccac gcgatggccgcaggcaagcgcggcagtcatctggccctcagtcttgagcgactgcaggcg ctgtgcggcgaaccgctgacccgcatcggcctgtcggccacgcagaaaccggtcgaagcc gtggcgcagtttctcgtcggccatgagcgcccctgcgaaatcatcgacatcggccatgcg cggccacgggatctgggcatcgaagtgccgcccgtgccgttgtcggcagtgatggccaac gatgtctgggaattggtctacgaccgcctcgccgaactcgctcgcgagcaccgcaccacg ctgattttcgtcaacacccggcgcctggccgaacgcctgagccggcacctcagcgaacgc ctgggcaaacacgccgtagccgcgcaccacggtagcctggccaaggagtttcgcctcgac gccgaacaacgactcaagcgcggcgaactgcaggtattgatcgctaccgcctcgctggaa ctgggcatcgatatcggcgaagtcgatctggtctgccagattgcctcaccgcgctctatc gccggttttctgcaacgtgttggccgctccgggcaccaagtgggcggcacacccaagggc cgtttgttcgccaccacccgcgacgacttgatcgaatgcaccgccctgctcgactgcgtg cgccgaggcgaactcgacaccctgcacatcccggtcgcgccgctggatgttttggcgcag cagatcatcgccgaagtcagttgtcaggaatggccggaggacgccttgctggcgatgttc cgccgcgcctcgccctaccgcgacctcgacgaaaaacactatcaagccctgctgagcatg ctcgctgaaggctacaacggtcgccagggcatccgcagcgcctacctgcaccgcgacgcc gtcagccgcaccttgcgtggccgtcgcggttcacaactgaccgccgtgaccagcggcggc accattcccgataacgccgactacagcgtcatgctcgagccgcatggcctgaacatcggc agcgtcaacgaagacttcgcggtggaaagtattgccggcgacgtgttccagctcggcaac acctcctatcgcatcctgcgcgtggaaaccggcaaggtccgcgtcgaggatgcccacggc cagccgccgaccattccgttctggctcggcgaagcgccgggacgcagcgatgaattgtca tcggctgtcgcacgtctgcaagcacaactcgatgaactgctcagcgccagccccggcaat ctgcaaccggcactcgactggctgacacagaccctcggcctcaaccgcgccagcgccgaa caattggtcgaatacctcgcccgcgcccggcagaccctcggcgccctgccctcgcaagac acgctgctgatggagcgttttttcgacgaatccggcggcacgcaattgatcatccattcg ccgttcggcagccgcatcaaccgcgcctggggcctggccctgcgcaagcgtttctgccgc accttcaacttcgaattgcaggccgccgccagcgaagacgcgatcgtcctgtcgctgtcc accagccacagcttcgaactcgatgacgtctggcgttacctgcacagcaacagcgccgag cacatcctaattcaagccgtactcgatgcgccgctgttcggtgtgcgctggcgctggaat gccggggtggcactggcattgccgcgctttaccggcgggcgcaaagttgcgccgcagttg cagcggatgaaaagcgaagacctgatcgccagcgtgtttcccgatcagatcgcctgcctg gaaaaccttgctggcgagcgcgagattcccgaacaccccttgattgagcaaactctcgac gattgcctgcacgaggcgatggacagcgagggctggctcaatctgctacggcgcatggag cgtggcgacgtgcgcttgatcagccgagacttgccggcgccatcgccgctcgccgcagaa attctcagtgcgcggccgtacacctttctcgacgatgcaccgctggaagaacggcgcact caagcggtaatcaaccggcgctggagcgatccgcaatcgaccgatgacctcggtgcgctg gatgcggacgcgattgccgccgtgcatgaagaggcgtggccgacgccgaacgctgtggat gaaatgcatgaggcgctgatgagcctggcgtgcatcagcgatgaggaagtgcaaacgaac gaaggctggcgtgcatggctggaaaatctggccagcagtggtcgcgcctgccgtctacag atcgatgccgagcatggcttgtggctggcccgcgaacgcctgacgtgtctgcaagcgctt tatccacaggccaaattgcaagccgaactggaggcgctgccgggattcgatgaggcgtgg acgttcgatgaagcgctggtcgaagtgatccgcgcacgcctcggtgccttcggaccgctg ccgttatccgcgattgccgaaccgctcgcgttgcaggccactgaagtccatcaagccctt gcccaactggagcgcgaaggttacgtgctacgcggccagttcacgcccaaggtcaacatt gaggaatggtgcgaacggcatctgctcgcgcgcattcatcgctacacggtcaagcgcctg cgccgggaaatcgaaccggtcgcgctgcaggatttcatgcggtttctgttcgactggcag catctgtcgcccacaactcgcggtcagggcagcgccgtgttgccagcgattgtcggccag ttcgaaggctacccggcggccgcttcggcgtgggacagcgacattcttccggcccgcctc aaagactactcaccgagctggctggatgatttgtgccgcaacggcaaactggtgtggacg cgcctcagtgcccggcagaaagtcagcggcacggcgttgcgcagcacgccgatcgtgttg ctgccgcgcagtcaggtcggcctgtggagtgcgctggccgaacagacgccggtgagcgaa ctttcgccgaaaacccagaaggtttttgaagccttgagtcaacacggcgcgctgtttttt gacgagctgagtcatgaagcgcacctgctgcgcaccgagctggaaatcgccttgcaggag ctggttggcgccggtctggtgaacgccgacagcttcgccggcctgcgcgccttgatcacc ccgccgagcaaacgccagcagcgcagcagtcgtcgcgggcgcggggcgtttgtcggtgga atggatgatgccgggcgctgggcgttgctgcggcgcggaacggctgtggataacagcgaa accctggaacatgtcgcgatgacattgttgcgccgttatggcgtggtgttctggcgcttg ctggagcgtgaggcggactggttgccgagctggcgcgaattgctgcgcacgtttcatcgg ctggaagcacggggcgagattcgcggtggacgatttgtcagtggtttggcgggggaacag tttgccttgcccgaggcgattccattgttgcgcgaagtgcggcggcggccgcatgacggc agtctggtcgcggtgtgcggggtcgatccattgaacctggccgggacgttgttgccaggc acgaaagtgccggcgctggtgagtaatcggttggtctatcgggatgggattccagcggcg gcggagattgccggaaagcagcagttttggctggagctggatcagatcgatatggagcag gtgcgcggcaagctgatccggcattga

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