Pseudomonas zeae: HU754_028040
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Entry
HU754_028040 CDS
T07528
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pze
Pseudomonas zeae
Brite
KEGG Orthology (KO) [BR:
pze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pze03009
]
HU754_028040 (dbpA)
Enzymes [BR:
pze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HU754_028040 (dbpA)
Ribosome biogenesis [BR:
pze03009
]
Prokaryotic type
rRNA helicases
HU754_028040 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
QXI11588
UniProt:
A0A9E6TBC1
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All DBs
Position
6362456..6363841
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AA seq
461 aa
AA seq
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MTTIATAFNTLPLSAAMLANLESLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAF
GIGLLNPINPRYFGCQALVICPTRELADQVAKEVRRLARAEDNIKVLTLCGGVSFGPQIA
SLEHGAHIIVGTPGRIQQHLRKGSLVLDGLNTLILDEADRMLDMGFYDAIEDIIVKTPER
RQTLLFSATYPVGIKQLASKFMRDPQTVKAEAFHDDTQIEQRFYEISPEDRMSVVTKVLH
HFRPASCVAFCFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVA
TDVAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAISLVAPGEAHRAQAIE
QLQKSPLNWDQVDNLKSQGLAPLQPPMTTLCIGAGRKDKVRPGDILGALTGDAGIPGAQV
GKIAIFDFQAYVAVDRTVAMQALQRLNDGKIKGRSLRVRIL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccatcgccaccgcttttaatactctgccgctgtccgccgccatgctggctaac
ctcgaatccctcggttatgcccagatgacgccgatccaggcgcagagcttgccggtgatc
ctcaaggggatggacctgatcgctcaggccaagaccggcagcggcaagaccgccgcgttc
ggcatcggcctgctcaacccgatcaacccgcgctacttcggttgccaggcactggtgatc
tgcccgacgcgcgagctggccgaccaggttgccaaggaagtccgtcgtctggcccgtgcc
gaagacaacatcaaagtcctgaccctgtgcggcggcgtgtcgttcggcccgcagatcgct
tcgctggaacacggcgcgcacatcatcgtcggcaccccggggcgtattcagcagcacctg
cgcaagggttcgctggtcctcgacggcctgaacactttgatcctcgacgaagccgaccgc
atgctcgacatgggtttctacgacgccatcgaagacatcatcgtcaagaccccggagcgc
cgtcagaccctgttgttctctgcgacttacccggtgggcatcaagcaactggcgtcgaag
ttcatgcgtgatccgcaaacggtgaaagccgaagcgttccacgatgacacgcagatcgag
cagcgtttctacgagatttccccggaagatcgtatgagcgtggtgaccaaagtcctgcac
cacttccgcccggcgtcctgcgtggcgttctgcttcaccaagcagcaagtgcaggaaacc
gtcgatcacctgaccgccaaaggcatttccgccgtcggcctgcatggcgatctggaacag
cgtgaccgcgatcaggtgctggcgatgttcgccaaccgcagtacctcggtactggttgcc
accgacgtcgccgcccgtggcctggacatcgatgcgctggacatggtgatcaacgtcgaa
ctggcgcgcgattcggaaatccacattcaccgcgttggccgtaccggtcgtgctggcgag
aaaggcatcgcgatcagtctggttgcaccgggtgaagcgcaccgcgcgcaagccatcgaa
caactgcagaaatcaccgctgaactgggatcaggtcgataacctcaagtcccagggcctc
gccccgctgcaaccgccgatgaccaccctgtgcatcggtgctggccgtaaagacaaggtt
cgtccgggcgacattctgggtgcactgactggcgatgccggcattcccggtgcacaggtt
ggcaagatcgcgattttcgacttccaggcttatgtagccgtggaccgcaccgtggccatg
caggccttgcagcgtttgaacgacggcaagatcaaaggccgttcgctgcgcgtacgtatc
ctgtaa
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