Paracoccus zhejiangensis: CX676_06315
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Entry
CX676_06315 CDS
T05233
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pzh
Paracoccus zhejiangensis
Brite
KEGG Orthology (KO) [BR:
pzh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pzh03016
]
CX676_06315 (rnd)
Enzymes [BR:
pzh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CX676_06315 (rnd)
Transfer RNA biogenesis [BR:
pzh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CX676_06315 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AUH66201
UniProt:
A0A2H5F3T0
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All DBs
Position
complement(1284123..1285292)
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AA seq
389 aa
AA seq
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MTTITTTEELAKFCEAAKAEAYVTLDTEFLRERTYYSKLCLIQMALPPASTAKIAGGQAV
LVDPMVKGLSLEPLYDLFRHKATVKVFHAARQDLEIFFHDAGIFPEPLFDTQVAAMVCGF
GEQVGYETLVRKIVKADLDKSSRFTDWSRRPLSDAQKAYALADVTHLRQIYEHLSAQLKK
SGRESWLAEEIGVLEDPETYITRPEDAWQRVRTRSNSPRFLAILRELARFRETYAQERDV
PRSRVYKDDAMIELASTKPADEGDLGKSRLLLREARRGEIAAGILAAVKAGQEARDLPEP
EKTEPGRPGNPALADLLRVLLKAKSDETGVASKLIASAADLDAIASGARDVPALSGWRAE
VFGADALRLAGGQIALSAEGGMVRVVPIG
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atcaccaccatcaccacgaccgaagaactggccaaattctgcgaggccgccaaggccgag
gcctatgtcacgctcgataccgaattcctgcgcgagcggacctattattccaagctctgc
ctgatccagatggccctgccacccgcctcgaccgccaagatcgcgggcgggcaggcggtg
ctggtcgatccgatggtgaagggcctgtcgctggagccgctttatgacctcttccgccac
aaggcgacggtcaaggtgttccacgccgcgcggcaggatctggagatcttcttccacgat
gccggcatcttccccgaaccgctgttcgacacgcaggttgcggccatggtctgcggcttt
ggcgagcaggtcggctacgagacgctggtgcgcaagatcgtcaaggccgatctggacaag
tcctcgcgcttcaccgactggtcgcgccggcccctgtcggatgcgcaaaaggcctatgcg
ctggcggatgtgacccatctgcgccagatctatgaacatctgtcggcgcagctgaagaaa
tccgggcgcgaaagctggctggccgaggagatcggcgtgctggaagaccccgagacctac
atcacccggcccgaggatgcctggcagcgggtgcgcacgcgctcgaactcgccgcgcttc
cttgccatcctgcgcgaactggcccgcttccgcgagacctatgcgcaggaacgcgacgtg
ccgcgctcgcgcgtctacaaggacgatgcgatgatcgagctggcctcgaccaagccggcg
gacgagggcgatctgggcaagtcgcgtctgctgctgcgcgaggcgcggcggggcgagatc
gcggcaggtatcctcgcggcggtgaaggccgggcaggaggcgcgcgatctgcccgagccg
gagaagaccgagccgggccgtccgggcaatccggcgctggccgatctgctgcgggtgctg
ttgaaggccaagtcggacgagaccggagtggcctcgaagctgatcgcctcggccgccgat
ctggatgccatcgccagcggggcgcgggacgtgccggcgctgtcgggctggcgcgccgag
gtcttcggcgccgacgcgctgcgtctggccggggggcagatcgcgctctcggccgagggc
ggcatggtgcgcgtggtcccgatcggctga
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