Paracoccus zhejiangensis: CX676_14540
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Entry
CX676_14540 CDS
T05233
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pzh
Paracoccus zhejiangensis
Pathway
pzh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pzh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CX676_14540 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pzh03019
]
CX676_14540 (recQ)
03400 DNA repair and recombination proteins [BR:
pzh03400
]
CX676_14540 (recQ)
Enzymes [BR:
pzh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CX676_14540 (recQ)
Messenger RNA biogenesis [BR:
pzh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CX676_14540 (recQ)
DNA repair and recombination proteins [BR:
pzh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CX676_14540 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HHH
Motif
Other DBs
NCBI-ProteinID:
AUH65239
UniProt:
A0A2H5F103
LinkDB
All DBs
Position
3015359..3017398
Genome browser
AA seq
679 aa
AA seq
DB search
MPADLLRQVWGFDDFRPGQREIVEAVADGHDVLAIMPTGGGKSLCFQLPALMREGVTVVI
SPLIALMRDQVRALREAGVPAGALTSGNTEVETEEVFAALRAGELKLLYMAPERLAGGGT
LNLLKRAGVTAIAVDEAHCVSQWGHDFRPDYLRIGDLKRELGVPLAAFTATADAETRAEI
VTRLFDGRAPETFLRGFDRPNIRLAFQPKDSPRRQILDFARARRGQSGIIYCASRAKTET
LAEALEREGMAAVAYHGGMEADLRRSVEGRFQQEDGLIVCATIAFGMGIDKPDIRWVAHA
DLSKSIESYYQEIGRAGRDGDPAETLTLYGPDDIRLRRMQIDEGQAENPRKEADHGRLNA
LLGLAEATGCRRRQLLGYFGEDLAGDCGNCDICAAPPKLFDATKAVQKALSAMLRTGEWF
GAGHLIDILTGTATEKVQARGHDRLPTFGVGGEFNRGQWQAIFRQMMGRDLCRPDPERHG
ALHLTEAAHPVLKGEVQVTLRHDMTLRAKPATVLRTQVAEEDEPLLSALKAKRRALAEAA
RVPAYVIFPDRTLIEMAERRPQTLDEMAQVSGVGAKKLDSYGREFLSVIAGAAPEMHPAR
MKLAGRPEGALFDRLVEAQALLSRGEDGTGKPLSCTSRTLKLVAEQRPRTLDELARVSGM
GEQKAERFGAAFLDAIAAG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgatctgctgagacaggtctggggcttcgacgatttccgccccggacagagg
gaaatcgtcgaagccgtggccgacggccatgacgtgctggcgatcatgccgacgggcggc
ggcaagtcgctgtgcttccagcttccggcgctgatgcgcgagggggtgacggtggtcatc
tcgccgctgatcgccctgatgcgcgatcaggtgcgggcgctgcgcgaagccggggtgccg
gccggggcgctgaccagcggcaataccgaggtcgagaccgaggaggtgtttgccgccctg
cgggctggcgagctgaaactgctctacatggcgccggagcggctggcgggcggcgggacg
cttaatctcctgaagcgcgccggcgtcaccgcgattgccgtggacgaagcgcattgcgtc
agccagtggggccatgacttccgccccgattacctgcgcatcggcgatctgaagcgcgag
cttggcgtgccgctggcggcctttaccgccaccgccgatgccgagacccgggccgagatc
gtcacgcggctgttcgatggccgcgcgcccgagaccttcctgaggggctttgaccggccg
aatatccggctggccttccagcccaaggacagcccgcggcggcagatcctcgatttcgcg
cgggcgcggcgcgggcagtcggggatcatctactgtgccagccgggccaagaccgagacg
ctggccgaggcgctggagcgcgagggcatggcggcggtcgcctatcacggcgggatggag
gcggatctgcgccgcagcgtcgaggggcggttccagcaggaggacgggctgatcgtctgc
gccaccatcgccttcggtatgggcatcgacaagcccgatatccgctgggtcgcccatgcc
gacctgtcgaaatcgatcgagtcctactatcaggagatcggccgggcggggcgggatggc
gatccggccgagacgctgacgctatacggtcccgacgacatccgcttgcgccggatgcag
atcgacgaggggcaggccgagaatccccggaaagaggccgatcacgggcggctgaatgcg
ctgctgggtctggccgaggcgacgggatgccggcggcggcaattgctcggatatttcggc
gaggatctggccggggattgcggcaattgcgatatctgcgccgcgccgccgaaactgttc
gacgcgaccaaggcggtgcagaaggcgctgtcggcaatgctgcgcaccggcgagtggttc
ggggcggggcatctgatcgacatcctgaccggcactgccaccgagaaggtgcaggcgcgc
ggccatgaccggctgccaaccttcggcgtgggcggcgagttcaaccgggggcaatggcag
gcgatcttccggcagatgatgggccgcgacctttgccgccctgatcccgagcgtcacggc
gcgctgcacctgaccgaggccgcccatccggtgctgaagggcgaggtgcaggtgaccttg
cgccatgacatgaccctgcgcgccaagccggcgacggtgctgcgcacgcaggtcgccgaa
gaggacgagccgctgctgtcggcgctgaaggccaagcggcgggcgctggccgaggcggcg
cgggtgccggcctatgtcatcttccccgaccgcacgctgatcgagatggccgagcggcga
ccgcaaacgctggacgagatggcgcaggtgagcggcgtgggggcgaagaaactggacagc
tatggccgcgagttcctgagcgtcatcgccggcgcggcgcccgagatgcatcccgcgcgg
atgaagctggccgggcggcccgagggcgcgctgttcgaccggctggtcgaggcgcaggcg
ctgctgtcgcgcggtgaggacggcaccggcaagcccttgtcctgcaccagccggacgctg
aagctggtggcggagcagcgaccgcggacattggacgagttggcccgggtctcaggcatg
ggcgaacagaaggccgaacgctttggcgcggcatttctggacgcgatcgcggcgggttag
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