Candidatus Phytoplasma ziziphi: CWO85_00325
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Entry
CWO85_00325 CDS
T05675
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pzi
Candidatus Phytoplasma ziziphi
Pathway
pzi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pzi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CWO85_00325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pzi03400
]
CWO85_00325
Enzymes [BR:
pzi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CWO85_00325
DNA repair and recombination proteins [BR:
pzi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CWO85_00325
Prokaryotic type
CWO85_00325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Glyco_transf_61
DUF3189
Motif
Other DBs
NCBI-ProteinID:
AYJ00989
UniProt:
A0A660HM84
LinkDB
All DBs
Position
complement(45775..46425)
Genome browser
AA seq
216 aa
AA seq
DB search
MTWKEFIYQERQKKYFRNIINFLEVESEIKKQIYPPLKNIFEAFVMTPLKDVKVVILGQD
PYFNINQAHGLSFSVKNEKTPSSLKNIFKELRDDVNLISKTNNLTLWAKRGVFLLNSILT
VEAGKPLSHQNIGWQEFTKNIFKFLNKKEKIVYILWGKLAQEYIKYIDIENNYILKSPHP
SPLSAYKGFFGSKPFSKTNSYLIKNKILPIDWDLNK
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgacgtggaaagaattcatttatcaagaaagacaaaaaaaatattttcgaaatataatt
aattttttagaagttgaatcggaaataaaaaaacaaatttatcctcctttgaaaaacatt
ttcgaagcttttgttatgactcctcttaaagatgttaaagtagttatattagggcaagat
ccttattttaatataaatcaagctcatggtttatcttttagtgttaaaaatgaaaaaact
ccttctagtttgaaaaatatttttaaagaattacgagatgatgtgaatttaatctctaaa
actaataatttaactttatgggctaaaagaggtgtttttttattaaatagtattttaaca
gttgaagcaggtaaacctttaagtcatcaaaatattggatggcaagagtttactaaaaat
atttttaaatttttaaataaaaaagaaaaaatagtttatattttgtggggaaaattagcc
caagaatatattaaatatattgatatagagaataattatattttaaaaagtccgcatcct
tcacccctttcagcttataaaggttttttcggttctaaacctttttctaaaactaattct
tatttaatcaaaaataaaatcttacctattgattgggatttgaataaataa
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