Candidatus Phytoplasma ziziphi: CWO85_00485
Help
Entry
CWO85_00485 CDS
T05675
Name
(GenBank) DNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
pzi
Candidatus Phytoplasma ziziphi
Brite
KEGG Orthology (KO) [BR:
pzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pzi03019
]
CWO85_00485
03009 Ribosome biogenesis [BR:
pzi03009
]
CWO85_00485
Enzymes [BR:
pzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CWO85_00485
Messenger RNA biogenesis [BR:
pzi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CWO85_00485
Ribosome biogenesis [BR:
pzi03009
]
Prokaryotic type
rRNA helicases
CWO85_00485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
AYJ01019
UniProt:
A0A660HMB6
LinkDB
All DBs
Position
74922..76166
Genome browser
AA seq
414 aa
AA seq
DB search
MENYIKQKLKQLNFEKVTPIQKEVFENFSKPFHLVGSAPTGTGKTHAYLLPILSQIDWNK
NIIQAVIIVPTNELIFQVFKMIKEIEQRTSQVKIFYGGMDKQKILTSLEKKQPPLIITTL
NKLMEYTTVFKKLNIFKSSFLVIDEADTLFEQNSLSLLDVLLAKWKPKILLFSASITNNM
NPFIQKYFGKSLFLDVHSQQKLNLTYYLLQSSPDKRLNDLIHFMKNLNPYSALIFVSKKE
EQSKIYEYLKSSNFNILNFSSDLNVKKRKYLMTEIKKNKYQYILTSDLCARGLDLDIEWV
IHYNLPSKNLEFFQHRSGRTGRMGKEGKVVLFYDDKEQASLTTIQKNYNIVFKKIALTAN
GFSEIKTTNSQNINNKKNNINKKTFSFSKKKKFISKTKTNSTINKKKVIFSRKK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattatattaaacaaaaattaaaacaattaaattttgaaaaagtaacacctatt
caaaaagaagtattcgaaaatttttcgaaaccttttcatttagtaggaagtgctcctaca
gggacaggaaaaactcatgcttatttattgccgattctaagtcaaattgattggaataaa
aatattattcaagcggttattattgtaccgactaatgaattaatttttcaagtatttaaa
atgatcaaagaaatagaacaaagaacttctcaagtaaaaattttttacggaggtatggat
aaacaaaaaattttaacaagtttagaaaaaaaacaacctcctttgattataactacttta
aataaattaatggaatatactactgtttttaaaaaacttaatatttttaaatcttctttt
ttagttatagacgaagcagatactttatttgaacaaaattcattatctttattagatgtt
ttattagcgaaatggaaacctaaaattttattattttctgcttccatcacgaataatatg
aatccttttatacaaaaatatttcggaaaatcattatttttagatgttcattctcaacaa
aaattaaatttaacatattatcttttacaaagttctcctgataaacgtttgaacgattta
attcatttcatgaaaaatttaaatccttattcagctttaatttttgtttctaaaaaagaa
gaacaatccaaaatatatgaatatttaaagagttctaattttaatattttaaatttctcc
tctgatttaaatgttaaaaaaagaaaatatttaatgacagaaattaaaaaaaacaaatac
caatatattttgactagtgatttatgcgctagaggcctagacttagatattgaatgggtt
attcactataatttgccttcaaaaaatttagaattttttcaacatcgtagcggaagaaca
ggaagaatgggaaaagaaggtaaagtagttcttttttacgatgataaagaacaagcttct
ttaacaacaattcaaaaaaattataatattgtttttaaaaaaatagctttaactgctaat
ggttttagtgaaataaaaacaacaaattcacaaaatattaataataagaaaaataatatt
aataagaaaactttttctttttcgaaaaagaaaaagtttatttcgaaaacaaaaacaaat
tctacaattaataaaaagaaagttattttttcaagaaaaaaatga
DBGET
integrated database retrieval system
