KEGG   Candidatus Phytoplasma ziziphi: CWO85_00575
Entry
CWO85_00575       CDS       T05675                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pzi  Candidatus Phytoplasma ziziphi
Brite
KEGG Orthology (KO) [BR:pzi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pzi03019]
    CWO85_00575 (rnc)
   03009 Ribosome biogenesis [BR:pzi03009]
    CWO85_00575 (rnc)
   03036 Chromosome and associated proteins [BR:pzi03036]
    CWO85_00575 (rnc)
Enzymes [BR:pzi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     CWO85_00575 (rnc)
Messenger RNA biogenesis [BR:pzi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CWO85_00575 (rnc)
Ribosome biogenesis [BR:pzi03009]
 Eukaryotic type
  90S particles
   RNase
    CWO85_00575 (rnc)
 Prokaryotic type
  rRNA processing factors
   CWO85_00575 (rnc)
Chromosome and associated proteins [BR:pzi03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     CWO85_00575 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm
Other DBs
NCBI-ProteinID: AYJ01035
UniProt: A0A660HLW8
LinkDB
Position
complement(94012..94698)
AA seq 228 aa
MHLKKLFRRLNIKPKNIKIYINALTHSSYANEHHFRKNNNERLEFLGDAVINFLMASYLY
KKNKDNEGIMTKKRAQAVCIDSLLIYAKEIELKNYILLGKGEKKRYDNNYSIIADAFEAL
FGAIYLDLGYDQAEKTFQYIILPYLKKIINIIDFKTKLQELIQTNKQNIHYKIISEKGLA
HEKEFITEVYLENKFLGRGLGKTKKASEQKAAQEALLKIEKERNIPNV
NT seq 687 nt   +upstreamnt  +downstreamnt
atgcatttaaaaaaattatttagaagattaaatattaaacctaaaaatattaagatatat
ataaacgctttaacacatagttcttacgctaatgaacatcattttagaaaaaataataac
gaaagattagaatttttaggagacgctgttattaattttttaatggccagttatttatat
aaaaaaaataaagataatgaaggtattatgaccaaaaaaagagcgcaagctgtttgtatc
gattctttattaatttacgctaaagaaatagaattaaagaattatattttgttaggtaaa
ggcgaaaagaaaagatatgataataattattctattatagcagacgctttcgaagcttta
tttggagctatttatttagatttaggatacgatcaagcagaaaaaacttttcaatatatt
atcttaccttatttaaaaaaaattatcaatattatagattttaaaactaaattacaagaa
ttaattcaaactaataaacaaaatattcattataaaattatttctgaaaaaggtttagcc
catgaaaaagaatttataacggaagtatatttggaaaataaatttttaggacgaggttta
ggaaaaactaaaaaagcttctgaacaaaaagcggcccaagaagctttactgaaaatagaa
aaagaaaggaatataccgaatgtttaa

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