Candidatus Phytoplasma ziziphi: CWO85_00575
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Entry
CWO85_00575 CDS
T05675
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pzi
Candidatus Phytoplasma ziziphi
Brite
KEGG Orthology (KO) [BR:
pzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pzi03019
]
CWO85_00575 (rnc)
03009 Ribosome biogenesis [BR:
pzi03009
]
CWO85_00575 (rnc)
03036 Chromosome and associated proteins [BR:
pzi03036
]
CWO85_00575 (rnc)
Enzymes [BR:
pzi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CWO85_00575 (rnc)
Messenger RNA biogenesis [BR:
pzi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CWO85_00575 (rnc)
Ribosome biogenesis [BR:
pzi03009
]
Eukaryotic type
90S particles
RNase
CWO85_00575 (rnc)
Prokaryotic type
rRNA processing factors
CWO85_00575 (rnc)
Chromosome and associated proteins [BR:
pzi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CWO85_00575 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
AYJ01035
UniProt:
A0A660HLW8
LinkDB
All DBs
Position
complement(94012..94698)
Genome browser
AA seq
228 aa
AA seq
DB search
MHLKKLFRRLNIKPKNIKIYINALTHSSYANEHHFRKNNNERLEFLGDAVINFLMASYLY
KKNKDNEGIMTKKRAQAVCIDSLLIYAKEIELKNYILLGKGEKKRYDNNYSIIADAFEAL
FGAIYLDLGYDQAEKTFQYIILPYLKKIINIIDFKTKLQELIQTNKQNIHYKIISEKGLA
HEKEFITEVYLENKFLGRGLGKTKKASEQKAAQEALLKIEKERNIPNV
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaaaaaaattatttagaagattaaatattaaacctaaaaatattaagatatat
ataaacgctttaacacatagttcttacgctaatgaacatcattttagaaaaaataataac
gaaagattagaatttttaggagacgctgttattaattttttaatggccagttatttatat
aaaaaaaataaagataatgaaggtattatgaccaaaaaaagagcgcaagctgtttgtatc
gattctttattaatttacgctaaagaaatagaattaaagaattatattttgttaggtaaa
ggcgaaaagaaaagatatgataataattattctattatagcagacgctttcgaagcttta
tttggagctatttatttagatttaggatacgatcaagcagaaaaaacttttcaatatatt
atcttaccttatttaaaaaaaattatcaatattatagattttaaaactaaattacaagaa
ttaattcaaactaataaacaaaatattcattataaaattatttctgaaaaaggtttagcc
catgaaaaagaatttataacggaagtatatttggaaaataaatttttaggacgaggttta
ggaaaaactaaaaaagcttctgaacaaaaagcggcccaagaagctttactgaaaatagaa
aaagaaaggaatataccgaatgtttaa
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