KEGG   Candidatus Phytoplasma ziziphi: CWO85_01105
Entry
CWO85_01105       CDS       T05675                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03086  RNA polymerase primary sigma factor
Organism
pzi  Candidatus Phytoplasma ziziphi
Brite
KEGG Orthology (KO) [BR:pzi00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CWO85_01105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pzi03021]
    CWO85_01105
Transcription machinery [BR:pzi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CWO85_01105
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r1_2
Other DBs
NCBI-ProteinID: AYJ01132
UniProt: A0A660HMC3
LinkDB
Position
complement(198315..199580)
AA seq 421 aa
MNLRKNFKKIYKKHHLKIEQENHSLVITPFEQKIQWLEQFYKNKDFFNSRLIKSIIMHDK
KFKNKRNNSRKKNPSKNDPFDKLYSTNNDMYNKEESQEDLNLEQISNSIKVNDPVKMYLK
EIGQIPLLTLEEEKIKSKMVYEGLIAKKKLEQYKKQEIELTYEQVQEINKQIEDAEKAKN
KLIEANYRLVVSIAKRYIGRKILFLDLIQEGNMGLMRAVDKFDYTKGFKFSTYATWWIRQ
AITRAVSDQARTIRIPVHIIETMNKISRCLGKLTQDLLRKVDNQELAMNMNIKKKEIVDI
QMIEKETISLETSAREEVDSSLGDFINDPNTISPHEYMLQEMLKKTLDESLEEVLTDKEE
QVLKMRYGLTDGHIYTLEELGNKFGVTRERIRQIEAKALRRLRSPSKQNKLRTLYNNIIK
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaatttaagaaaaaattttaaaaaaatctataaaaaacatcatttgaaaatagaacaa
gaaaatcattcacttgttattactcctttcgaacaaaagattcaatggttagaacaattt
tataaaaataaagatttttttaactcaagacttattaaatccataattatgcatgataaa
aaattcaaaaataaaaggaataattctagaaaaaaaaatccatctaaaaatgatcctttt
gataaattatattcaacaaataatgatatgtataataaagaagaatctcaagaagattta
aatttggaacaaatttctaattctattaaagtaaacgatcctgttaaaatgtatcttaaa
gaaataggtcaaattcctttattaactttagaagaagaaaaaataaaatccaaaatggtt
tatgaagggttaatagctaaaaaaaaattagaacaatataaaaaacaagaaatagaatta
acatatgaacaagtacaagagataaataaacagatagaagatgctgaaaaagctaaaaat
aaattaatcgaagctaattatcgtttagtagtttcgatagccaaacgttatataggaaga
aagattttatttttagatttaattcaagaaggcaatatgggcttgatgagagcagtcgat
aagttcgattatactaaaggttttaaattttctacttatgctacttggtggataagacaa
gcgattacaagagctgtatctgatcaagctagaacaattcgaattccagttcatattatt
gaaacaatgaataaaatttctcgttgtttaggaaaattaacacaagatttattacgtaaa
gttgataatcaagagttagctatgaatatgaatatcaaaaaaaaagaaattgtggatatt
caaatgatagaaaaagaaactatttctttagaaacatcagctagagaagaagttgattct
tctttaggagattttatcaatgatcctaatactatttctcctcatgaatatatgttacaa
gaaatgttaaaaaagaccttagatgaatctttagaagaagttttaacagataaagaagaa
caagttttaaaaatgcgttatggccttacagatggacatatttatactttagaagaatta
ggtaataaatttggagttactcgcgagagaattcgccaaatagaagctaaagctttaaga
cgtttaagaagcccttctaagcaaaataaattaagaacattgtataataatattattaaa
aaatga

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