Candidatus Phytoplasma ziziphi: CWO85_02290
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Entry
CWO85_02290 CDS
T05675
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pzi
Candidatus Phytoplasma ziziphi
Brite
KEGG Orthology (KO) [BR:
pzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pzi03032
]
CWO85_02290 (gyrB)
03400 DNA repair and recombination proteins [BR:
pzi03400
]
CWO85_02290 (gyrB)
Enzymes [BR:
pzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CWO85_02290 (gyrB)
DNA replication proteins [BR:
pzi03032
]
Prokaryotic type
DNA Topoisomerases
CWO85_02290 (gyrB)
DNA repair and recombination proteins [BR:
pzi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CWO85_02290 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AYJ01566
UniProt:
A0A660HP35
LinkDB
All DBs
Position
445723..447627
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AA seq
634 aa
AA seq
DB search
MKKYNADSIQVLEGLEAVRIRPGMYIGSTSEKGLYHLVWEIIDNSIDESLAGFADEINLE
ILDNNIIRISDNGRGIPVDIHPKTNKPAVETILTTLHAGGKFDNSSYQISGGLHGVGASV
VNALSSWFIVEIHLNNEIYYQKYEKGTPIIPLTKKGFTNQKGTIITFTPDPTIFEIMENF
NYKLDVLKDRMQQIAFLNKNIKLNIIDSRVQPVQKFNFYYKEGVKEYILYLNQNKNTLTQ
IFYKEYFSNNIFYEITFQYTNKYNQNIYSFVNNIPTKEGGTHEEGFKIALNRILNKYAKD
KKILKKETNLISEDTLEGITAVISLKHPNPLFEGQTKNKLGSHEVRQFISKSFGEFLESH
LLENPQEAKQIIDKCLLSMKARIAAKKAREITRKKMSLDLLNFNSKLTDCYTKDPILSEL
YIVEGDSAGGSAKQGRDSQFQAILPLRGKIINVEKSHAEKVLSNNEIVSLIQAIGTGIDK
EFNLSKARYHRIIIMTDADVDGAHIRTLILTFFFRNLKPLIENGYIYFAQPPLYKVEKNK
QIKYFYNEKDYKEYKNIIEIQNKKISSQRYKGLGEMNPEQLWDTTMDPKHRTLLKVCLKD
AVEADKIFDKLMGKLVSQRKKFIEQNAYKANIDI
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
attaagaaatataacgctgacagtattcaagttttagaaggattagaagctgttaggata
agacctggtatgtatatcggttctacttctgaaaaaggtttataccatttagtttgggag
attatagataattctatagatgaatcattagcaggttttgctgacgaaattaatttagaa
attttagataataatattattcgtatttccgataacggaagaggtataccagtcgatatc
catccaaaaactaataaaccagctgtagaaactattttgactactttgcatgctggcgga
aaattcgataattcttcttatcaaatttctggaggattacatggagttggagcttctgtt
gtaaatgctctttcttcttggtttattgtcgaaattcatttgaataatgaaatatattat
caaaaatatgaaaaaggcactccaatcattcctttaactaaaaaagggttcacaaatcaa
aaaggaacaataattacatttactcctgatccgacaatttttgaaattatggaaaatttt
aattataaattagatgttttaaaagatagaatgcaacagatagcttttttgaacaaaaat
attaaattaaacattattgatagtagagttcaaccagttcaaaaatttaatttttattat
aaagaaggtgttaaggaatatattttatacttaaatcagaataaaaacactttaactcaa
attttttataaagaatatttttctaacaacatattttatgaaattactttccaatataca
aataaatataaccaaaatatttattcttttgttaataatattcctacaaaggaaggcggg
acacacgaagaaggttttaaaatagctttaaataggatattaaataaatatgctaaagat
aaaaaaatattaaaaaaagaaaccaatttaattagcgaagatactttagaaggtattaca
gctgttatttctttaaaacatcctaatccattatttgaaggtcaaactaaaaataaatta
ggcagtcatgaagttaggcaatttatttctaaatcttttggtgaatttttggaaagtcat
ttattagaaaatcctcaagaagctaagcaaataatagataaatgtttattatctatgaaa
gctagaatagctgctaaaaaagcacgtgaaattactagaaaaaaaatgtctttagactta
ttaaattttaattctaaattaactgattgctatacaaaagatcctattttatctgaatta
tatattgtagagggagattcggcgggaggttctgctaaacaaggaagagattctcaattt
caagctattttaccattaagaggtaaaattattaatgtagaaaaatctcatgcagaaaaa
gttttaagtaataatgaaattgtctctttaatacaagcaataggaacaggtattgataaa
gaatttaatttaagtaaagcgcgttatcatcgtattattataatgacagatgctgatgtc
gacggagctcatattagaactttaattcttactttcttttttagaaatttaaaaccttta
attgaaaatggttatatttattttgcgcaaccgcctctatacaaagtagaaaaaaataaa
caaattaaatatttttataatgaaaaagattataaagaatataaaaacatcattgaaatt
caaaataaaaaaatttcttcacaaagatacaaaggtttaggggaaatgaatccagaacaa
ctttgggacactactatggatccgaaacacagaactttattgaaagtatgtttgaaagac
gctgtagaagctgataaaatttttgataaattaatggggaaacttgtttctcaaagaaaa
aaatttattgaacaaaacgcttacaaagcaaatatagatatttaa
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