Candidatus Phytoplasma ziziphi: CWO85_02910
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Entry
CWO85_02910 CDS
T05675
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pzi
Candidatus Phytoplasma ziziphi
Pathway
pzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWO85_02910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pzi03019
]
CWO85_02910
03016 Transfer RNA biogenesis [BR:
pzi03016
]
CWO85_02910
Enzymes [BR:
pzi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CWO85_02910
Messenger RNA biogenesis [BR:
pzi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CWO85_02910
Transfer RNA biogenesis [BR:
pzi03016
]
Prokaryotic type
tRNA degradation factors
CWO85_02910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Motif
Other DBs
NCBI-ProteinID:
AYJ01431
UniProt:
A0A660HN13
LinkDB
All DBs
Position
603007..605148
Genome browser
AA seq
713 aa
AA seq
DB search
MNSQIFKTVFENNLLTVEISKLAKQANGSVLFRYKNSVILTVVVCSKKDTVLNYFPLTVV
YQEKLYAVGKIPGSFTKREGKPSDHEVLNSRLIDRTLRPLFPKQFKKEVQIVNTILSSDY
DGNNEIFAIFSSSLSLLVSDIPYIESVSGVCIGKINNQFIVNPNSKQREKSDFLLTLSGT
KNSLNMIEAVCKETTEEVLLEAMIYGHEIIKKLCLFQDEIKEKINPQKQFLLESYWNEEL
YNQIENKYRIQIKDILYINSENKNDSKSFKNIIDQLKEKLLAEYQNNNDFLLENRQNFHH
IEDIFYDLLRQEFRKMTIKDKKRIDGRELYEIRKIESQISLLPRTHGSALFTRGQTQSLA
VVTLGTLRESKMIDDLTEEEEKRFILHYNFPYYSVGEIGRYMAPSRREIGHGILAEKALF
YLLPSEEEFPYSIRVVSEILESNGSSSQATICASSMALMDAGVPLKQAVAGIAMGLFLDE
KEYVILTDIQGFEDKEGDMDFKIAGTQKGITALQMDIKQKGIKFDILKEALKKARLGRIE
ILKQMGAIIPKHNDEVSIFAPKVQVIRVKTDKIRDIIGTGGKIISRIIEKHDNVQIDIKP
DGNIFITHYNIDIVRKTANYILNLVKEIKVGEVFKVTILKILSDKQGQSFGAVAEICPGI
EGFIHISQLDNKKTAKVEDVLNVGDKLFVKCIEINNRGKISLSLKDYKNKIIK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgaattcgcaaatatttaaaactgtttttgaaaataatctattaactgttgaaataagt
aaattagctaaacaagctaatggttcggtattatttcgttataagaatagcgttatttta
actgtagtagtttgtagtaaaaaagatacagttttgaattattttcctttaacagttgtt
tatcaagaaaaactttatgctgtaggaaagatacccgggagttttactaaaagagaaggt
aaaccgtctgatcacgaggttttaaattctcgtttgatagatagaactttaagaccttta
tttcctaaacaatttaaaaaagaagttcagatagtgaatactattttaagtagcgattac
gatggtaataacgaaatatttgctattttttcaagttctttatctttgttagtatcagat
atcccttacatagagtctgtatcgggagtatgtataggaaagatcaataatcaatttatt
gttaatcctaattcaaaacaaagagaaaaatcagattttttattgactttgtcaggtact
aaaaacagtttaaatatgatagaagccgtttgtaaagaaacaacagaagaagttttatta
gaggctatgatttatggtcatgaaattattaaaaaactttgtttgtttcaagatgaaatt
aaagaaaaaattaatcctcaaaaacagtttttgttagaatcttattggaatgaagagtta
tacaatcaaatagaaaataaatatcgaattcaaataaaagatattttatatataaactca
gagaataaaaacgattctaaatcatttaaaaatattatagatcaattaaaagaaaaatta
ttagcagaataccagaataataatgattttttattagaaaatagacaaaattttcatcat
atagaagatattttttatgatttattacgtcaagaatttagaaaaatgactattaaagat
aaaaaaagaattgacggtagagaattatacgaaattagaaaaatcgaaagtcaaataagt
ttgttacctagaactcatggatcagctcttttcacaagagggcaaacacaaagtttagct
gttgtaactttaggaaccttaagagaaagtaaaatgattgatgatttaacagaagaagaa
gaaaaacgttttattttacattataattttccttattattctgttggtgagataggaagg
tatatggcgccttctagaagagaaatcggtcatggaattttagctgaaaaagcattattt
tatcttttaccttcggaagaagaatttccttattctattagagtagtttcagaaatttta
gaatctaatggttcttcttcacaagctactatttgtgcgtcttcgatggctttgatggac
gcaggagttcctttaaaacaagctgtcgcaggaatagctatgggattgtttttagatgaa
aaagaatatgttattttaactgatatccaaggttttgaagataaagaaggcgatatggat
tttaaaatagccggaactcaaaaaggaattactgctttgcaaatggacattaaacaaaaa
ggtattaaattcgatattttaaaagaagctttaaaaaaagcacgtttaggaagaatagaa
attttgaaacaaatgggcgctatcattcctaaacataatgatgaagtttctattttcgct
cctaaagttcaggttattcgtgttaaaactgataaaataagggatataataggcacaggt
ggaaaaataatttctagaattattgaaaaacatgataatgttcaaatagatattaaacca
gatggaaatatttttataactcattataatattgatattgttagaaaaacagctaattat
attttaaatttagttaaagaaattaaagtaggtgaagtttttaaagtaactattttaaag
attttaagtgataaacaaggtcaatcttttggagcggtagctgaaatttgtccaggaatc
gaaggattcattcatattagtcaattagataataaaaaaacagcaaaagtagaagatgtt
ttaaatgtaggcgataaattatttgttaaatgtattgaaatcaataatagaggtaaaatt
tcattatctttaaaggattataaaaataaaattataaaataa
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