KEGG   Candidatus Phytoplasma ziziphi: CWO85_02950
Entry
CWO85_02950       CDS       T05675                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
pzi  Candidatus Phytoplasma ziziphi
Pathway
pzi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pzi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CWO85_02950 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pzi03019]
    CWO85_02950 (rny)
Messenger RNA biogenesis [BR:pzi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CWO85_02950 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_2 KH_KhpA-B
Other DBs
NCBI-ProteinID: AYJ01436
UniProt: A0A660HNS0
LinkDB
Position
614370..615935
AA seq 521 aa
MNHIDNSFLFVLFFIFAGLVIFIYFLSKKKISEKIRQTDESIEKKILKSQLLSAQIISET
EKKISLLKKETENDLNQRRNIIINLEEKIIHKEELLASRFKYLHEKEEFLYNKEQKININ
KKYLEELQNKIEKIMIQQQNKLEQISSLTQIEAREIILKQVKENSYQEIINYEREQEKEY
KFKIKNKAKNLLILTMQKLSRDVVYEHNISMIFLEQDSLKGRIIGKEGRNIKAFEVVTGV
DLIIDDNPNTVILSCFDPIRREIAKRTLEALIIDGRITPSSIEKTFLKKSEEIDEFIQEI
GEEAVYEAKIGFIDEELVKLLGKLHFRTSYGQNVLKHSLEVSFLAGCLAAETGENEIIAR
KAGLLHDIGKALDYQTEGSHVTIGVELAKKYKESLEVIDAIASHHEDQESTTLIAVLVSI
ADTISSARPGARKDSIENYIQRITQLENIADSVEGVSKSYAIRSGREIRVIVKSEEVDDL
NTFLIAKQIRKKIQKNIHYNGFIQITVLRELRVIDIAEINN
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgaatcatattgataacagtttcttgtttgttttattttttatttttgctggattagta
atttttatatattttttgtctaaaaaaaaaataagtgaaaaaataagacaaacagacgaa
agtattgaaaaaaaaatattaaaatctcaattactttcggctcaaattatttcagaaacc
gaaaaaaaaatttctttattaaaaaaagaaacagaaaacgatttaaatcaaagaagaaac
ataattattaatttagaagagaaaattattcataaagaagaattattggcttctagattt
aaatatctacatgaaaaagaagaatttttatataataaagaacaaaaaataaatattaat
aaaaaatatttagaagaactacaaaataaaatcgaaaaaataatgatacaacaacaaaac
aaattagaacaaatttcttctttgactcaaatagaagccagagaaattattttgaaacaa
gttaaagaaaattcttatcaagaaataataaattacgaaagagaacaagaaaaagaatat
aaatttaagatcaaaaataaagcaaaaaatttattaattttgacaatgcaaaaattatct
agagacgttgtttatgaacataatattagtatgatttttttagaacaagatagtttaaaa
ggaagaattatcggcaaagaaggacgtaatataaaagcttttgaagttgttaccggtgta
gatttaataatagatgataatccgaatacagttattttaagttgtttcgatcctattaga
agagaaattgcgaaaagaactttagaagctctaattattgatgggagaatcactccttca
agtattgaaaaaacatttttaaaaaaatccgaagagattgatgagtttatacaagaaata
ggcgaagaagcagtttatgaagctaaaataggatttattgatgaagaattagtaaaatta
ttaggtaaattgcattttagaactagttatggccaaaatgttttaaaacattctttagaa
gtatcttttttagcaggatgtttagctgcggaaacaggagaaaatgaaattatagctaga
aaagctggtcttttacatgatattggtaaagctttagattaccaaacagaaggaagtcat
gttacaatcggagttgaacttgctaaaaaatataaagaatctttagaagtaatagacgcc
atcgcttcacatcatgaagatcaagaatcaaccactttaatagctgttttagtttcgatc
gcggatacaattagttctgctagaccaggagctagaaaagactcaattgagaattatatt
caaagaataactcaattagaaaatattgctgatagcgttgaaggggtatcaaaatcttat
gccatcagatctggcagagaaataagagttattgttaaatctgaagaagttgatgattta
aatacttttttaatagctaaacaaattagaaaaaaaattcaaaaaaatattcattataat
ggttttattcaaattactgttcttagagagttgagagtaattgatatagctgaaatcaat
aattaa

DBGET integrated database retrieval system