Candidatus Phytoplasma ziziphi: CWO85_03215
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Entry
CWO85_03215 CDS
T05675
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pzi
Candidatus Phytoplasma ziziphi
Pathway
pzi03030
DNA replication
pzi03430
Mismatch repair
pzi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pzi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CWO85_03215
03430 Mismatch repair
CWO85_03215
03440 Homologous recombination
CWO85_03215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pzi03032
]
CWO85_03215
03400 DNA repair and recombination proteins [BR:
pzi03400
]
CWO85_03215
Enzymes [BR:
pzi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CWO85_03215
DNA replication proteins [BR:
pzi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CWO85_03215
DNA repair and recombination proteins [BR:
pzi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CWO85_03215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AYJ01487
UniProt:
A0A660HN61
LinkDB
All DBs
Position
complement(670449..673148)
Genome browser
AA seq
899 aa
AA seq
DB search
MIGVFYLQSFYSIMESIPSLESLVKKAKENQYQFLALSDHENLHGMVNFFELCQKHKIKP
ILGMKIFLSLKEIIDQDKRINFLIYALNDIGINNLIKISNLIKIKQENITLEILKQFQEG
LFFVLSNIDFELSNINYPILIEPILTQLKNNLNFFFVGLSLQSQNLEMFVDIFLPLIKKL
KIFVVPAHKTNFLEPEQEEGHKLLLELNNPWKYSQNSSDEKMSFQFLNLKEIQNKYNYYY
NDSDYRECFLDLNSFMDKIQYNKLFPSDIGLPIWKDSSTKNSFAYLEEITNSFLKQKISV
SSSQFPLYLKRLQKELKIIKDMHYEDYFLIVFDIVRYTREKKILLGSGRGSSPGSLVCFC
LGITEADPLYYNLLFERFLNPKRNKKPDIDLDFPDDKINIILKYIYEKYGENYTANIITF
NTLTTKSFVRNANYINYLKKNLKVNKSDPKQIRILSQLKGMPQFTGTHPAGVIISNKNLL
ENIPIQKNPHANSPFKYQTQLDANYLEKIGLSKIDLLSLNSLSLIDKILKEINKQREEKI
SWQQFPLNDYQTYQLLQKGDTEYIFQLESSAAKQVLRKIKPQNFEDLNAVLALNRPGQIN
YINDYCRNKQAEKNFLIEKSVYNYIEHILKNTYGIILYQEQIMEISVSFAGYDFGEAEIF
MKYIIQKVISDNDKNLIKSEFVKRSQQKGHSEQLANQIYDYILKFSNYSFNKSHSVSYSL
ISYRMAYLKTHFLVPFLTVILNENQNISYDKEMLLKKIKNTNKIKIIAPNIFISGVDYEL
SKEKLVLPLTLIRNVNNEIASFFINERIKKKFVNFFDFKNRCQKVLNNDLLKDLVLAGVF
DDFGLNKNTLLNESNLDYLEHEQYLLSFKKEILLDELPEEYLKKEIYRIFGFNLNVVLN
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgataggtgttttttatcttcaaagtttttatagtattatggaaagtattccttcatta
gaatctctagttaaaaaagcaaaagaaaatcaatatcaatttttagctttaagtgatcat
gaaaatttgcatggaatggttaatttttttgaactttgtcaaaaacacaagattaaaccc
atcttaggaatgaaaatatttttatctttaaaagaaattattgatcaagataaaagaatt
aatttcttaatttatgctctaaatgatataggaattaataatttaattaaaatatctaat
ttaatcaaaatcaaacaagaaaatatcactttagaaattttaaaacaatttcaagaaggt
ctcttttttgttttatctaatatagatttcgaactttctaatataaattatcctatatta
atagaaccaattttaactcaattaaaaaataatttaaattttttctttgttggcttgtct
ttacaatcacaaaatttagaaatgtttgttgatatttttttacctttaataaaaaaatta
aaaatttttgtagttccagctcataaaactaattttttggaacctgaacaagaagaaggg
cataaattattattggaattaaataatccttggaaatattcacaaaattcttcagatgaa
aagatgtcttttcaatttttgaatctaaaagaaattcaaaataaatataattattattat
aatgatagtgattatcgagaatgttttctagatttaaattctttcatggataaaattcaa
tataataaactttttccttctgacattggacttcctatatggaaagattcttctacaaaa
aattcttttgcatatttagaagaaataacaaattcttttttgaaacaaaaaatttctgtt
tcttcttctcaatttcctctttatttaaagagattacaaaaagaattaaaaattatcaaa
gatatgcattatgaagattattttttaattgtttttgatatagtaagatatacaagagaa
aaaaaaattcttttaggttctggaagagggtcgtctcctggttctttagtttgtttttgt
ttaggcattacagaggcagatcctttatattataatctgcttttcgaaaggtttttgaat
cctaaaagaaataaaaaaccagatattgatttagattttccagatgataaaataaatatt
attttaaaatatatttatgaaaaatatggagaaaattatacggctaatataatcactttt
aacactttaactactaaatcttttgttagaaatgctaattatattaattatctgaaaaaa
aatctaaaagttaataaatctgatccgaaacaaattagaattctttctcaattaaaagga
atgcctcaatttacaggaacacatccagcaggtgttattatcagtaataaaaatttatta
gaaaatattccaattcaaaaaaatcctcatgctaactctcctttcaaatatcaaactcaa
ttagatgctaattatttagaaaagataggtttatccaaaatagatttattaagtttgaat
agtttatctttaattgataaaattttaaaagaaatcaacaaacaaagagaagaaaaaata
tcttggcaacaatttcctttaaatgattaccaaacttatcaattattacaaaaaggagat
acagaatatatttttcaattagaatcttcagcggccaaacaggtcttaagaaaaattaaa
cctcaaaattttgaagatttgaatgctgttttagctttgaatagaccaggtcaaatcaat
tatattaatgattattgtcgcaataaacaggcagaaaaaaattttttaattgaaaaatca
gtttataattatatagaacatattttaaaaaatacatatggaattattttatatcaagaa
caaataatggaaatatctgtttcctttgctggttatgattttggcgaagcagaaattttc
atgaaatatatcattcaaaaagttatttcagataatgacaaaaatttaattaaatcagaa
tttgtcaaacgcagtcaacaaaaaggtcattctgaacaattagcaaatcaaatttatgat
tatattttaaaattttctaattatagttttaataaaagtcatagtgtgtcttattcttta
attagttatcgtatggcttatttgaaaactcattttcttgttccttttttaacagttatt
ttaaatgaaaatcaaaatatttcttatgataaagaaatgttattaaaaaaaataaaaaac
acaaataaaattaaaattattgctcctaatatttttattagtggtgtagattatgaatta
tcaaaagaaaaacttgtattacctttgactttgattagaaatgtaaataacgaaatagct
tcatttttcataaatgaaagaattaagaaaaaatttgttaatttttttgattttaaaaat
agatgccaaaaggttttaaataatgatttattaaaagatttagttttagcaggtgttttt
gatgattttggtttaaataaaaacactttattaaatgaatctaatttagattatttagaa
catgaacaatatttgctttctttcaaaaaagaaattctattagatgaattaccagaagaa
tatttaaaaaaagaaatttatagaatttttggttttaatttaaatgttgttctgaattaa
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