Candidatus Phytoplasma ziziphi: CWO85_03475
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Entry
CWO85_03475 CDS
T05675
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pzi
Candidatus Phytoplasma ziziphi
Brite
KEGG Orthology (KO) [BR:
pzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pzi03016
]
CWO85_03475 (truB)
Enzymes [BR:
pzi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CWO85_03475 (truB)
Transfer RNA biogenesis [BR:
pzi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CWO85_03475 (truB)
Prokaryotic type
CWO85_03475 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AYJ01532
UniProt:
A0A660HNI3
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All DBs
Position
727864..728715
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AA seq
283 aa
AA seq
DB search
MNGFFLINKEKNMSSHDAIYLIKKKLNLNKIGHTGILDPMAEGLLIVLINKATKLAFLFE
NLDKTYQGSIIFNKNFDTLDVTGKIIDTKTNILSIEEIEKSFLFFSKKKYLQVPPMYSAI
KIKGKKMYNLARKNIQIDIPPRKVNIKNLKITSSFENDSIDFETKVSKGTYIRSLARDIA
SQMNTYGALKKLTRTKIGLYNLKKAQNINSVDFKNLIDVKILFKKTQKIILNDYLIKLVK
NGVLLDERQISTTKSFLVLDKNQNWIAYYEPIQKNKYYPKYFF
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtttctttttaattaacaaagaaaaaaatatgtcatctcatgatgctatttat
ttaataaaaaaaaaattaaatcttaataaaataggacatacagggattttagatcctatg
gcagaaggtcttttaattgttttgataaataaagctacaaagttagcttttttatttgaa
aatttagataaaacatatcaagggagtattatttttaataaaaattttgatactttagac
gtaacagggaaaataattgacacaaaaacaaatattttatcaatagaagaaattgaaaaa
agtttccttttctttagtaaaaaaaaatatttacaagttcctcctatgtattcggctatc
aaaattaaaggaaaaaaaatgtataatttagcaagaaaaaatatacaaattgacattcct
cctagaaaagttaatattaaaaatttaaaaataacatcttctttcgaaaatgattcaatc
gatttcgaaaccaaagtatcaaaaggaacgtatataagaagcttagctagagatattgcg
tctcaaatgaatacctacggcgcattaaaaaaattaacaagaactaaaataggtttatat
aatttaaaaaaagctcaaaatattaattcagtcgatttcaaaaatttaatcgatgttaaa
atattatttaaaaaaacacaaaaaattattttaaatgattatttaattaaattagttaaa
aatggcgttttattagatgaaagacaaatttcgacaacaaaatcatttcttgtcttagat
aaaaatcaaaattggattgcttattatgaaccaatacaaaaaaataaatattatcccaaa
tattttttttga
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