Providencia zhijiangensis: QS795_001555
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Entry
QS795_001555 CDS
T09966
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pzj
Providencia zhijiangensis
Pathway
pzj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pzj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QS795_001555 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pzj03021
]
QS795_001555 (rpoC)
03400 DNA repair and recombination proteins [BR:
pzj03400
]
QS795_001555 (rpoC)
Enzymes [BR:
pzj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QS795_001555 (rpoC)
Transcription machinery [BR:
pzj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QS795_001555 (rpoC)
DNA repair and recombination proteins [BR:
pzj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QS795_001555 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
EAD9
Motif
Other DBs
NCBI-ProteinID:
WPA92494
UniProt:
A0ABZ0N2E7
LinkDB
All DBs
Position
341161..345384
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLIKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVVEGGMTSLERAQILTEEQYLDALEEFGDEFDAKM
GAEAIQGLLKNLDLENECETLREELNETNSETKRKKLTKRIKLLEAFIQSGNKPEWMILN
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPASGEPIIVPSQDVVLGIYYMTRDCVNAKGEGMVLAGPKEAERVYRSG
HASLHARVKVRITEEVKDSEGNITINTGLVDTTVGRAILWMIVPKGLPYSLVNQALGKKA
ISKMLNTCYRVLGLKPTVIFADQIMYTGFAYAARSGASVGIDDMVIPEKKAGIIAEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTEAVINRDGQEEQQVSFN
SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTHEGILMTPVIEGGDVKEPLRERVL
GRVTAEDILIPGTADILVPRNTLLHEKLCDLLEANSVDSVKVRSVVSCETDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVRNTGTLKL
FNAKYVTNSEGKLVITSRNTELRLIDEFGRTKESYKVPYGAHLTKGDGAAVIGGETVANW
DPHTMPVVSEVSGIISFSDMLEGLSMTRQTDELTGLSSIVVMDTAERTSAGKDLRPALRV
IDANGKDVLIPNTDMPAQYFLPGNAIVQLDDGIAINVGDTLARIPQESVGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPLDGSEPYEEMIPKWRQLNVFE
GEIVERGDVVSDGPESPHDILRLRGVHAVTRYITNEVQEVYRLQGVKINDKHIEVIVRQM
LRKVTIADAGSSEFLEGEQVEYSRVKVSNRKLETEGKIPANFERDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGFAYHQDRIRRRHLSEAVE
APQVSADEATANLAELLNAGFTSDNQN
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttaattaagtttctgaaagcgcaaaccaagaccgaagagtttgatgcgatc
aagattgctctggcatcacctgacatgatccgttcatggtcatttggtgaagttaaaaag
ccagaaaccattaactaccgtacgttcaaacctgagcgtgacggtcttttctgtgcgcgt
attttcgggccagtaaaagactacgaatgcctgtgcggtaagtacaagcgtttaaaacat
cgcggtgtgatttgtgagaagtgtggcgttgaagttacacaaactaaagtgcgtcgtgag
cgtatgggtcatattgaactcgcgtctccaactgcgcatatttggttcttaaaatcactg
ccatcccgtatcggtttgctgctcgatatgccactgcgcgatatcgaacgcgttctgtat
tttgaatcttatgttgttgttgaaggcgggatgaccagtcttgagcgcgcacagattctg
acagaagagcaatacttagatgcgctagaagagttcggtgacgaattcgacgcgaaaatg
ggtgcggaagcaatccaaggtctgctgaaaaacctcgatcttgagaacgagtgtgaaacg
ctgcgtgaagagttaaacgaaactaactcagaaaccaagcgtaaaaagttgactaagcgt
atcaaactgttagaagcgtttattcaatctggtaacaaaccagagtggatgatcctgaac
gttctgccagttctgccacctgatctgcgtccattagtaccactggatggtggtcgtttc
gcaacgtcggatctgaacgatctgtatcgtcgcgtaatcaaccgtaacaaccgtctgaaa
cgtcttctggatctggctgcgccagatatcatcgtacgtaacgaaaaacgtatgctgcaa
gaagcggttgacgcactgttagataacggtcgtcgtggtcgcgcaatcactggttctaac
aaacgtcctctgaaatctttggcagatatgatcaaaggtaaacaaggtcgtttccgtcag
aacttacttggtaagcgtgttgactactcaggtcgttctgtaatcaccgtaggtccatac
ctgcgtctgcatcagtgcggtctgcctaagaaaatggcacttgagttattcaaaccattt
atctacggcaaattagaattacgtggtctggcaacaaccattaaagctgcgaagaaaatg
gttgagcgcgaagaagcggttgtttgggatatcttggatgaagttatccgcgaacaccca
gttatgctgaaccgtgcaccaacacttcaccgtctgggtatccaagctttcgaaccaatt
ctgatcgaaggtaaagctatccaattgcacccactcgtttgtgcggcatataacgccgac
ttcgatggtgaccaaatggcggtacacgttcctctgactctggaagctcagttagaagca
cgtgcgttgatgatgtcaaccaacaacatcctgtctccggcaagtggtgagccaatcatc
gttccttctcaggacgttgtattaggtatctactacatgacgcgcgactgcgtaaacgcg
aaaggcgagggcatggttttagccggtcctaaagaagctgagcgtgtttaccgttcaggt
catgcttcactgcatgcccgcgttaaagttcgtatcactgaagaagtgaaagacagcgaa
ggtaacattacgattaacactggtttagttgataccactgttggccgtgcaattttatgg
atgatcgtaccgaaaggtctgccttactctctggttaaccaggcgttaggtaagaaagca
atctccaaaatgctgaacacctgttaccgcgtactgggtctgaaaccaactgttattttt
gctgaccaaatcatgtataccggttttgcctacgcggcacgttctggtgcatcggttggt
atcgacgatatggttattccagagaaaaaagctgggattatcgccgaagcagaagcagaa
gttgcagaaattcaggaacagttccagtctggtctggttacagcaggcgaacgttacaac
aaagttatcgatatctgggcagcagcaaacgaacgtgttgctaaagcgatgatggaaaac
ttgtctactgaagcagtcattaaccgtgacggccaagaagaacaacaagtttccttcaac
agtatctttatgatggccgactccggtgctcgtggttctgcagcgcagattcgtcagctg
gccggtatgcgtggtctgatggctaagccagatggctccatcatcgaaacgccaatcacg
gcgaacttccgtgaaggtctgaacgttctccagtactttatttctacccacggtgctcgt
aaaggtcttgcggataccgcattgaaaactgcgaactccggttatctgactcgtcgttta
gttgacgttgctcaggacttggttgtcactgaagatgactgtggtactcacgaaggtatc
ctgatgactccggttatcgagggtggcgacgttaaagaaccactgcgtgaacgtgtactt
ggacgtgtaactgcagaagatatcctgatcccaggtactgcagatattctggttccacgt
aatacactgttacacgaaaaactgtgtgacctgttagaagctaactctgttgacagtgtg
aaagtacgttccgtagtaagttgtgaaactgacttcggtgtgtgtgctcactgttatggt
cgtgaccttgctcgtggtcatatcatcaacaaaggtgaagctatcggtgttatcgcggca
caatcaatcggtgagccgggtacacagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggcagcagaatctagcatccaagttcgtaacacaggtacgttgaaactg
ttcaacgcgaaatatgttactaactcagaaggcaagctggtaattacttctcgtaataca
gaactgcgtctgattgacgaattcggtcgtactaaagagagctataaagttccttacggt
gcgcacttaacgaaaggtgatggtgcagcagttatcggcggtgaaaccgttgcaaactgg
gatccacataccatgccagttgtcagtgaagtatcgggtatcatcagcttctccgacatg
cttgaaggtctgtcaatgactcgtcaaactgatgagttaaccggtctatcttcaatcgtt
gttatggataccgctgagcgtaccagtgctggtaaagacttacgtcctgcactgcgtgta
atcgatgcgaatggtaaagatgttctgatccctaacacggacatgcctgctcagtatttc
ttaccgggtaacgcaattgttcagttagatgatggcatcgctatcaacgtcggtgatact
ttagcgcgtattccacaagaatccgtaggtactaaagatatcacgggtggtctgccacgc
gttgctgacctgttcgaagctcgtcgtccgaaagagcctgcgattctggctgaaatcagc
ggtattatctcgtttggtaaagaaaccaaagggaaacgccgtctggttatcactccatta
gatggaagtgagccatacgaagagatgatccctaaatggcgtcagcttaacgtattcgaa
ggtgaaatcgttgaacgcggtgacgtcgtttctgatggtccagagtctccacatgacatc
ctgcgtctgcgtggtgttcatgctgtgactcgttacatcaccaacgaagttcaggaagtt
taccgcttacaaggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatg
ctgcgtaaagttaccatcgcggatgcaggaagctctgaattcctcgaaggtgagcaagtt
gaatactcacgagttaaagtttctaaccgtaaactggaaactgaaggcaagattccagct
aactttgagcgtgatctgttgggtattactaaggcatctctggcaacagaatcctttatc
tcagcggcatcgttccaagaaacaactcgcgtactgacagaagcagcggtagcaggtaag
cgtgatgaattacgcggcctgaaagaaaacgttattgttggacgtctgatcccagctggt
accggtttcgcgtaccaccaagatcgtatccgtcgtcgccatctgagcgaagctgtggaa
gctccacaagttagcgcagatgaagcaacagcgaacttagctgaactgttaaatgcaggc
ttcaccagcgacaatcagaactaa
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integrated database retrieval system
