Providencia zhijiangensis: QS795_003025
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Entry
QS795_003025 CDS
T09966
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pzj
Providencia zhijiangensis
Brite
KEGG Orthology (KO) [BR:
pzj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pzj03400
]
QS795_003025 (sbcD)
DNA repair and recombination proteins [BR:
pzj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QS795_003025 (sbcD)
Archaeal homologous recombinant proteins
QS795_003025 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
WPA92770
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All DBs
Position
complement(697246..698460)
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AA seq
404 aa
AA seq
DB search
MRIIHTSDWHLGQYFFTKNRSAEHQHFLRWLIEQVNQYQVDALIVAGDVFDTGAPPSYAR
ELYNQFIVDLQKTGCQLVILSGNHDSVSVLNESSALLRYLNTHVITSNSESPVITLKDKQ
GNPNGLVCAIPFLRPRDIQVSIAGQSSEEKQLSLQNAIREHYQSCYQKAVEQRTEQGLDI
PIIATGHLTVVGAELTDSVREIYIGTLDAFPSGAFPPADYIALGHIHRPQLIGGQAHIRY
SGSPIALSFDESQQQKSVCLVEFNQHQFTNATLLPIPVFQPLLSLKGSLKELQKQLMDLP
VQENERPIWLDIEVATQDYLGDIQQRIEALTQELPVEVVRLRRARRAQTGQNLTPQNETL
SELTAEEVFTRRLTEESLEDKALEQRLLQLFKQSYANLRNEQGE
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcatccacacttcagactggcatttaggtcagtattttttcactaaaaaccga
tctgctgaacaccaacactttttgcgttggttaatagagcaagtcaatcagtaccaagtg
gatgccctgattgtggctggcgatgtttttgatactggcgcaccgccaagttatgcgcgc
gaactctacaaccagtttattgttgatttgcaaaaaacaggctgccaattagttatcttg
agtggaaaccatgattctgtctctgttttgaatgaatccagcgcgttattacgttattta
aatactcacgtcatcacatcaaacagcgaatcccctgtcatcacattgaaagataagcaa
gggaacccaaatgggttagtgtgcgcaatcccctttttacggccacgagatatccaagtc
agtattgcggggcaaagcagtgaagaaaaacaactttcattacaaaatgccattcgtgaa
cactaccaaagctgttaccaaaaagccgttgagcaacgtactgagcagggcttagatatc
ccgattattgccacggggcatttgaccgtcgtcggtgcagaactgacagattccgtgcgt
gaaatttatatcggcacattggatgcctttccttctggtgcgttcccacctgctgattat
attgcgctcggacatatccatcggcctcaactgattggtggacaagcacatattcgctac
agcggctctccgattgcactcagttttgacgaatcacaacaacaaaaaagtgtctgctta
gtggagtttaatcagcaccaatttaccaatgccactttgctgccaattcccgttttccag
ccgctattgagtttaaaaggctcgttgaaagaactgcaaaaacaattaatggacttacct
gtccaagaaaatgagcgccctatttggttagatattgaagtcgccacccaagactacctt
ggtgatatccagcaacgtattgaggcgctcacccaagaactccctgtcgaagttgttcgc
ctacgccgagctcgacgggcacaaacaggtcaaaacctcactccgcagaatgaaacatta
agtgaactgactgccgaagaagtttttacccgacgacttaccgaagagtcactggaagac
aaagcgttagagcagcgtttattgcagctgttcaagcaatcctacgccaacttgcgcaat
gagcagggagaataa
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