Providencia zhijiangensis: QS795_004955
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Entry
QS795_004955 CDS
T09966
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pzj
Providencia zhijiangensis
Pathway
pzj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pzj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QS795_004955 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pzj03019
]
QS795_004955 (rhlE)
Enzymes [BR:
pzj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QS795_004955 (rhlE)
Messenger RNA biogenesis [BR:
pzj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QS795_004955 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
WPA93121
UniProt:
A0ABZ0N5Q4
LinkDB
All DBs
Position
1100863..1102284
Genome browser
AA seq
473 aa
AA seq
DB search
MTSFSDLALNEEILRAINELGYESPTPIQQQAIPAVLAGKDLLASAQTGTGKTAGFTLPI
LQKLVDNPRGNNRRPIRALILTPTRELAAQVAENVKEYSRHLRIRSFVVFGGVSINPQMM
KLRGGVDVLIATPGRLLDLEHQNAVDLSQVEVFVLDEADRMLDMGFIHDIRRVITKLPKK
RQNLLFSATFSDEIKQLASKLLNNPVSIEVAPRNSASEQVTQYVHLVDKKRKAELLSFMI
GRENWQQVLVFTRTKHGANRLAEHLNKDGVKAAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEQLPYVVNFELPNVAEDYVHRIGRTGRAEATGMAVSLVCIDEAKLLKDI
EKLLKKSIPQMEIEGYEPDPSIKAEPIQKPSQRNDRRGSDSRRGSDNRRGSDNRRSSEDS
RGERSNHSGHNSNKGPSRPRRQNANSEKGQSESTSGSPWKNAQKRVRQGRNDS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
ttgactagtttttctgacctcgcgttaaacgaggaaatcttgcgtgccattaatgaatta
ggctatgaaagccctacgcctattcaacaacaagctattcctgctgttttagcgggcaaa
gacctattagccagcgctcaaacaggtacgggtaaaactgctggttttactttacctatt
ttgcaaaagctggtggacaatccacgcggtaataaccgtcgccctattcgcgcattgatt
ttaaccccgacccgtgaacttgcggctcaagtggctgaaaatgtaaaagaatatagccgt
catttgagaattcgttcatttgttgtgtttggtggtgtcagtattaacccgcagatgatg
aaattgcgcggcggtgtggatgtgttgatcgcaacacccggtcgtttactggacttggaa
catcaaaacgcggtggatttatcacaggttgaagttttcgtcttggatgaagctgaccga
atgttagatatgggctttattcacgatattcgccgtgtaatcacgaaattacctaaaaag
cgccaaaatctcctgttctcagcgacgttctccgatgagatcaaacagttggcgagcaag
ttattgaacaatccggtttccattgaagtggctccacgtaactcagcgtctgagcaagtg
acgcaatatgttcatttagtggataaaaaacgtaaagccgaattgctgtcgtttatgatt
ggccgtgaaaactggcagcaagtgctagtatttacacgcactaagcatggcgctaaccgc
ttagctgagcatttaaataaagatggcgtaaaagcagcggcgattcatggcaataagagc
caaggtgcgcgtacccgtgctttagctgattttaaatcaggggatatccgcgttttagtc
gcaacagatatcgcggctcgtggcttagatatcgaacaactgccttacgtagttaacttt
gagctaccgaatgtggcagaagattacgttcatcgtattggtcgtactggccgcgcagaa
gccacgggtatggcggtgtctttagtgtgtatcgatgaagcgaaactgcttaaagatatc
gagaaattattgaagaaatccatcccacagatggagatcgagggctacgagccagaccca
tcaatcaaagctgagccgatccaaaagccttctcagcgtaatgatcgtcgtggttctgat
agccgccgtgggtctgataaccgtcgtggttcggataatcgccgtagctctgaggatagc
cgcggtgagcgcagcaatcattcaggtcataacagtaataaaggcccaagccgtcctcgt
cgccaaaatgcaaattccgagaaaggtcaatctgaatcgacttcaggttcaccgtggaaa
aatgcacagaagcgcgttagacaagggcgtaatgatagctaa
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