Providencia zhijiangensis: QS795_007865
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Entry
QS795_007865 CDS
T09966
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pzj
Providencia zhijiangensis
Brite
KEGG Orthology (KO) [BR:
pzj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pzj03016
]
QS795_007865 (rnd)
Enzymes [BR:
pzj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
QS795_007865 (rnd)
Transfer RNA biogenesis [BR:
pzj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QS795_007865 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Speriolin_N
Motif
Other DBs
NCBI-ProteinID:
WPA93665
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All DBs
Position
1717684..1718805
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AA seq
373 aa
AA seq
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MNYRLVTTDSELAQVCQEASDAPWLALDTEFVRTRTYYPQLGLLQLYDGKQVSLIDPLLM
TDFSPFKALLTNPNQLKFLHAGSEDLEVFMHDFGCVPEPMIDTQIVAAFLGYPISCGFAT
LVAEHLGVELDKSESRTDWLARPLSLKQCDYATADVLYLLPLAKILMEKVTEAGYLADAQ
DECQRVVARRQKTVKPEKAYLNITNAWQLRDEQLACLQLLAAWRLDQAKARDMAINFVIK
EENLWKVARYLPSSLGELDALGLSGQEIRCHGRRLLSIVEEAKKLDASQYPEPVANITEQ
SQYKSIFKEIKGVVKEIAENEKFNPELLASRRQINQLLAVHWGLKEKSCQPELLAGWRGR
LLEAPLTQLLSQA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattaccgtttagtcacaacagatagcgaattagcccaagtctgccaagaggccagt
gatgcgccgtggttagcattagatactgagtttgttcgcacacgaacctattacccgcaa
ctgggtttattgcagttgtatgatggaaaacaggtttcactgattgatccgctattaatg
acggattttagcccatttaaggcgctgttaaccaatccaaaccaattgaagtttttacat
gcaggcagcgaagatttagaagtgtttatgcatgattttggttgtgtgccagagccgatg
atagatactcaaatcgtcgcggcatttttgggttatcccatttcttgcggcttcgctacg
ttggtggcagagcatttgggtgtcgagctagataaaagcgaatctcgaacagactggctc
gcgcgtcctttaagtttgaagcagtgtgattatgcgacggcggatgtactttatttactg
ccactagccaaaattttgatggaaaaagtgacagaagcaggttatttagctgatgcccaa
gacgaatgccagcgagtggttgcgcgtcgtcaaaaaacagttaaacctgaaaaagcctac
ttaaatatcaccaatgcgtggcaattacgtgatgaacaacttgcttgcttacagctgctg
gcagcatggcgtttggatcaagcaaaagcgcgggatatggcgatcaatttcgttattaaa
gaagaaaacctgtggaaagtcgctcgttatttaccgagctctttaggcgaactggatgct
ctcggtttatctggacaagaaattcgctgccatggtcgccgcttgttaagtattgtcgaa
gaagcgaagaaactggacgccagccagtatccagaacctgttgctaatattactgagcag
agccaatacaaaagcatttttaaagagatcaaaggggtggtgaaagagatcgccgagaat
gaaaaattcaacccagagttattagcatctcgtcgacaaattaaccagttattagcggtg
cattgggggctaaaagagaaatcatgtcagcctgaactgcttgctggttggcgaggtcgg
ttactagaagcgccattaacccaattacttagccaagcgtaa
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