Providencia zhijiangensis: QS795_008655
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Entry
QS795_008655 CDS
T09966
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pzj
Providencia zhijiangensis
Brite
KEGG Orthology (KO) [BR:
pzj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pzj03016
]
QS795_008655
Enzymes [BR:
pzj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
QS795_008655
Transfer RNA biogenesis [BR:
pzj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QS795_008655
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
WPA93816
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All DBs
Position
1891820..1893763
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AA seq
647 aa
AA seq
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MFQDNPLLAQLKQTLHAKTPRVEGLVKSTEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
SAAVHTDKDREFAEPEELIEPFLNRFVGKIQKKDNDNRLFVIPDHPLLKDAISCRPLNGI
THEFKQGDWVVAEMRRHPLKGDKGFYAEITEYITFGDDHFAPWWVTLRRHQLDRAEPAMV
ESERDDEGLERIDLTDLHFVTIDSASTEDMDDALYIEKTTEGNLKLYIAIADPTSYIKEG
SELDKLALARSFTNYLPGFNIPMLPRQLSDDLCSLRPNARRPALVCVTQILRDGSIDSNI
EFFSAWVESKTKLVYDEVSDWLEETGSWKPQSDADTQQILLLKEMADKRLQWRHDNALVF
KDRPDYRFVLDENGNVVNIVSESRRTANRIVEEAMITANLCAANVLKNKLGFGVFNVHMG
FEPLQIEQVVQTLKDNGIEAKGEELLTLEGFRQLRRLLDSQPTQFLDSRIRRFQTFAEVK
ADPGPHFGLGFDAYATWTSPIRKYTDIVNHRLLKSIIAGAPTPEKPSEELSLKLAERRRA
NRMAERDVGDWLYSRYLKPFEGTDTKFPAEIIDITRGGVRVRLVDNGAVAFIPAPFLHSV
RDEIQCSQETGSVLIKGEKAYQLNDIIDVNIAEVRMETRNIVARPAA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagacaacccattattagcgcaactcaaacaaacgttgcacgccaaaacacct
cgcgtcgaaggtctggtgaaaagcactgaaaaaggctttggctttttagaagtcgatgga
caaaaaagctatttcattccacctccgcaaatgaaaaaagtgatgcacggggatagaatt
tctgctgctgttcatacggataaagaccgtgaatttgctgagcctgaagagcttatcgag
ccattccttaaccgttttgttggtaaaattcagaagaaagataacgacaatcgcctgttc
gttattcccgatcatccactgctaaaagatgccatttcttgtcgcccactcaatggtatc
actcatgaatttaagcaaggtgactgggttgtcgcagaaatgcgtcgccatccattaaaa
ggcgacaaaggtttctacgcagaaattacggaatatattaccttcggtgatgaccatttc
gcaccgtggtgggtaacgttacgccgtcaccaattagatcgcgctgaacctgctatggtg
gaaagtgagcgtgatgatgaaggcttagagcgtattgatttaactgaccttcactttgtc
accatcgacagtgcaagcactgaagatatggatgatgcgctgtatatcgagaaaacaact
gaaggcaacctgaaactgtatatcgcgattgccgacccaaccagttatatcaaagaaggc
agtgagttggataaactggcattagcccgttcattcactaactaccttccaggcttcaac
attccaatgttgcctcgccagctgtctgatgatttatgttcactgcgtccaaatgctcgt
cgccctgctctggtttgcgttacgcagatcctgcgagacggctcaattgatagcaatatt
gaattcttcagtgcgtgggtcgagtccaaaacgaaactggtttatgacgaagtttctgat
tggttagaagaaacgggttcttggaaaccacagtctgatgccgacactcagcaaatcctg
ctattaaaagagatggcagataagcgcttacaatggcgccatgataatgccttagtcttc
aaagacagaccggattaccgctttgttttagacgaaaatggcaacgtggtgaatatcgtc
tcagaaagccgtcgtaccgcaaaccgcattgttgaagaagcgatgatcaccgctaactta
tgtgcggctaacgtactgaaaaacaaattaggtttcggtgtatttaacgtccatatgggc
tttgaaccgctgcaaatcgaacaagtggttcagaccttgaaagataatggcatcgaagca
aaaggcgaagagctattaacccttgaaggtttccgtcaattacgccgcctcttggattca
cagccaactcaattcttagacagccgtattcgccgcttccaaacctttgcggaagtcaaa
gcggatccgggccctcactttggtttaggttttgatgcgtatgccacatggacatcgcca
attcgtaaatacaccgatatcgtcaaccaccgtttgctgaaatcgattattgcgggtgct
ccaacgccagaaaaaccaagcgaagaattatctcttaagctggcagaacgccgccgtgct
aaccgtatggctgagcgtgatgtgggtgattggctatattcccgctacctaaaaccgttt
gaaggtactgacaccaagttccctgcggaaattatcgatattactcgcggtggtgtgcgt
gtgcgtttagtggataatggcgccgttgcctttattcctgccccattcctgcacagtgtt
cgtgatgaaattcagtgcagccaagagactggtagcgtgctgattaaaggcgaaaaagcc
tatcaattaaacgatattattgatgttaatatcgccgaagtgcgtatggaaacccgtaat
atcgtggctcgcccagccgcgtag
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