Providencia zhijiangensis: QS795_008730
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Entry
QS795_008730 CDS
T09966
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pzj
Providencia zhijiangensis
Brite
KEGG Orthology (KO) [BR:
pzj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pzj03032
]
QS795_008730 (topA)
03400 DNA repair and recombination proteins [BR:
pzj03400
]
QS795_008730 (topA)
Enzymes [BR:
pzj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QS795_008730 (topA)
DNA replication proteins [BR:
pzj03032
]
Prokaryotic type
DNA Topoisomerases
QS795_008730 (topA)
DNA repair and recombination proteins [BR:
pzj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QS795_008730 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
WPA90586
LinkDB
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Position
complement(1909506..1912124)
Genome browser
AA seq
872 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGSGYVVKSSVGHIRDLPKSGSGSQSGSPKSTGSSTDKAK
TDKTKKVKKDPQEALVKRMGIDPYHGWKANYQILPGKEKVVSELKALAEDADHVYLATDL
DREGEAIAWHLREVIGGDDSRFSRVVFNEITKNAITQAFESPGELNIDRVNAQQARRFMD
RVVGYMVSPLLWKKVARGLSAGRVQSVAVRLIVEREREIKAFVPEEYWELHADLADKNAV
NLRLEVTSQAGKAFKPVNKVQTEAAVKLLEKARYQVIDREDKPTSSKPSAPFITSTLQQA
ASTRLSFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGAQYLPKDA
NVYTSKDNSQEAHEAIRPSSVDVLPDSLKDMENDAKRLYQLIWNQFVACQMTPAKYDSTT
LTVKAGDFELKAKGRTLRFDGWTRVMPALRKNDEDKTLPAIQVGAELSLLELLPSQHFTK
PPARFSEASLVKELEKRGIGRPSTYAAIISTIQDRGYVKVENRRFYAEKMGEIVTDRLEE
NFNDLMNYDFTARMENQLDHVANHEAEWKAVLDEFFSDFSKQLDVAEKDPEEGGMRTNPM
VITSIICPDCERHMGIRTASTGVFLGCSGYALPPKERCKKTINLIPEDEVLNILEGDDAE
TNALRAKRRCPKCGTAMDSYLIDNGRKLHVCGNNPACEGYEIEEGEFRIKGYDGPVIECD
KCGSEMHLKMGRFGKYMGCTNEECKNTRKILKSGEIAPPKEDPVPLPELPCEKSDAYFVL
RDGAAGVFLAANTFPKSRETRAPLVAELQRFKDRLPEKLAYLAEAPAQDEEGNPTVVRFS
RKTKQQYVSSEKDGKATGWSAFYVDGQWKPKE
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctcttgttatagtggagtccccggcaaaagccaaaacgatcaataagtat
cttggcagtggctacgttgtaaaaagcagcgttggccacattcgtgatctgccgaaaagc
ggctctggttcacaatccggctcaccaaagagtacaggctcatctaccgataaagcaaag
accgacaaaacaaagaaagttaaaaaggatccgcaagaagcgttagttaaacgcatgggg
atcgacccttatcatggttggaaggcgaattatcaaattctgccgggtaaggaaaaagtg
gtttctgaattaaaagcgttagccgaagatgctgaccacgtctacctcgcgacggacctt
gaccgtgaaggggaagctattgcgtggcatttacgtgaagtgatcggtggtgatgattct
cgttttagccgagtggtgtttaacgaaatcactaaaaatgcaattactcaagcatttgaa
agtccgggcgaattgaatatcgaccgtgttaatgctcagcaagctcgtcgctttatggac
cgtgttgttgggtatatggtctctccattattatggaaaaaagtggcgcgcggattatct
gctggacgcgtacagtccgtcgcagtaagacttattgttgagcgtgaacgtgaaattaaa
gcgtttgttcctgaagaatattgggagctccatgcggatttagcggataaaaacgccgtt
aacttacgtttagaagtgacttcccaagcggggaaagcctttaaacctgttaataaagtc
caaacggaagcagcggttaaattactggaaaaagctcgttatcaagtaattgatcgtgaa
gataaaccaacgtccagtaaaccaagtgcaccgtttatcacgtcgacactccaacaagcg
gcgagtactcgcttaagctttggtgtgaagaaaactatgatgatggctcagcgcttatat
gaagcgggttacatcacttatatgcgtacggactcaacgaacttgagccaagatgcagtg
aacatggtacgtggttatatttccgataactttggcgctcagtatctgccaaaagacgcc
aacgtttacaccagtaaagataactcccaagaagcgcacgaagctatccgcccatccagt
gttgatgtattacctgattcactgaaagacatggaaaatgatgcgaagcgcctctaccag
ttaatttggaatcaatttgttgcatgtcaaatgaccccagcaaaatacgactccaccaca
ttaacggtgaaagcgggagatttcgaattaaaagccaaaggccgtacgttacgttttgat
ggttggacaagagtcatgccagcactacgtaaaaatgacgaagataaaacattacctgcg
attcaagtaggtgctgaattatcactgctggaattactaccaagccagcactttactaag
ccaccagcgcgctttagtgaagcttctttggttaaagaattagaaaaacgtggcattggt
cgcccatcaacgtatgcggcaatcatttcaacgatccaagatcgtggctacgtaaaagtg
gaaaaccgccgtttctatgcggaaaaaatgggtgaaatcgttacagaccgtttagaagaa
aacttcaacgacctgatgaactacgactttaccgctcgcatggaaaaccagctggatcac
gttgcgaatcatgaagcagagtggaaagcggtgttggatgaatttttctctgacttcagc
aagcagcttgatgtcgcagaaaaagatccagaagaaggcggcatgcgtaccaacccaatg
gtgatcacttcgattatctgtcctgactgtgaacgtcatatgggaattcgtaccgcatcc
acaggggtattcttaggctgctctggctatgcattgccaccaaaagagcgctgcaagaaa
accatcaatctgatccctgaagatgaagtattaaacatcctcgaaggcgacgatgcagaa
actaacgccttaagagcaaaacgtcgttgtccaaaatgtggcactgcgatggacagctac
ctgattgataatggtcgtaaattgcatgtatgtggtaacaacccagcatgtgaaggctat
gaaatcgaagaaggcgagttccgcatcaaaggttacgatggtccggtgattgagtgtgat
aaatgtggttctgaaatgcacctaaaaatgggacgttttgggaaatacatgggttgcacc
aacgaagagtgtaaaaatacccgcaagatcttaaaaagcggtgaaattgcaccaccgaaa
gaagacccagtaccgttaccagaattaccgtgtgaaaaatcggatgcttattttgtgtta
cgtgatggtgctgctggtgtattccttgccgcaaacaccttcccgaaatcgagggaaaca
cgtgcgccattagtggcagagctgcaacgatttaaagacagactaccggaaaaactggcg
tacttagcggaagcaccagcacaagacgaagaaggcaacccaacagtagttcgttttagc
cgcaagacaaaacagcaatatgtttcgtccgagaaagatggcaaggcgacggggtggagt
gcgttttatgttgatgggcaatggaaacccaaagagtaa
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