Providencia zhijiangensis: QS795_010100
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Entry
QS795_010100 CDS
T09966
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
pzj
Providencia zhijiangensis
Pathway
pzj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pzj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
QS795_010100 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pzj03400
]
QS795_010100 (sbcB)
Enzymes [BR:
pzj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
QS795_010100 (sbcB)
DNA repair and recombination proteins [BR:
pzj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
QS795_010100 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QS795_010100 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QS795_010100 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WPA90842
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All DBs
Position
2190858..2192297
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AA seq
479 aa
AA seq
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MDLILKNKHNQPTFFIHDYETFGKHPALDRPAQFAGVRTDLDFNIIDEPEVFYCKPTDDY
LPQPEAVMITGITPQIAMANGVNEAEFAKRIHNAFSVPNTCIMGYNNIRFDDEVTRNIFY
RNFYDPYAYSWQQGNSRWDLLDALRACFALRPEGINWPENDDGLPSLRLEHLTKANGVAH
ENAHDAMSDVLATINMAKLLKQAQPRMFDYFYQLRNKNKVNQLIDIVDMTPLVHVSGMFG
AVRSYISLVAPLAWHPENKNAVIMCDLSADMSPLLTLNADELRERLYTPKAELGDELPVP
VKLVHINKCPILAPEKTLRTVDAERTGIDRDLCLRNLELLRKNPDVRNKLIELFSIAQQF
EESNDVDSQIYNGFFSPSDRSTMDIIRETPPQNLPALDLSFEDKRMKELFFRYKARNFPA
TLSYEEQQRWLQHRRDYFTESRLTDYLQQIQLLMEVHHEDEKRCQQLKALVNYAAELAS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggacctcattttgaaaaataagcataatcagccgaccttctttatccatgactatgaa
acatttggtaagcatccggcgctggatcgccctgctcagtttgcgggtgtgcggacagac
ttagatttcaacatcatcgatgaacctgaagtattttactgcaaacctacggatgattat
cttcctcaaccagaagcggtaatgataactggcattaccccgcaaatcgcgatggccaac
ggcgtgaatgaagcggaatttgcgaagcgcattcataacgcattcagcgtacctaacacc
tgcattatgggttacaacaacattcgctttgatgatgaagtgacgcgaaatattttctat
cgtaacttttatgacccatatgcctatagctggcagcaaggtaattctcgctgggattta
ctggatgcattacgcgcttgttttgcattacgacctgaagggatcaactggccagaaaat
gatgacgggctacctagcttacgccttgaacatttaaccaaagctaacggcgttgcccat
gaaaatgcccatgatgcgatgtctgatgttttagcgaccatcaatatggctaaattgcta
aagcaagctcaaccccgcatgtttgattatttctatcaactgcgaaataaaaacaaagtt
aaccagctgatcgacatcgtggatatgaccccgttagttcatgtatcagggatgtttggc
gcggtacgctcttatattagcttagttgcccctcttgcgtggcacccggagaataaaaac
gcggtgattatgtgtgacctgtctgccgatatgtcgccgcttctcacgttaaatgcggat
gaacttcgtgagcgcttatacacaccgaaagccgaattaggtgacgagctccccgtccca
gttaaactggtacatattaacaaatgcccaatccttgcccctgaaaagaccttgagaacg
gtggatgctgagcgtacaggtattgaccgtgacctgtgcttgcgtaatttagaattgttg
cgtaagaaccctgatgtgcgtaataaactgattgagttgtttagcatcgcccaacaattt
gaagagtcaaatgacgtggatagccaaatctataatggttttttcagcccgtccgatcgc
tctacgatggacattattcgcgaaacgccaccccaaaatttacccgcattagatcttagc
tttgaagataagcgtatgaaagagctatttttccgttataaggcacgcaatttccctgca
acactctcttatgaagagcaacagcgttggttacagcatcgccgcgattattttactgaa
agtcgtttaacggattatctacagcaaatccaattactcatggaagttcatcatgaagat
gaaaaacgctgccaacaattaaaagccttagtgaactatgccgccgaattagcaagttaa
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