Providencia zhijiangensis: QS795_011710
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Entry
QS795_011710 CDS
T09966
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pzj
Providencia zhijiangensis
Brite
KEGG Orthology (KO) [BR:
pzj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pzj03009
]
QS795_011710 (srmB)
Enzymes [BR:
pzj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QS795_011710 (srmB)
Ribosome biogenesis [BR:
pzj03009
]
Prokaryotic type
rRNA helicases
QS795_011710 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WPA91145
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All DBs
Position
2538031..2539386
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AA seq
451 aa
AA seq
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MTASTFSELELDESLITALTNKGYERPTAIQEAAIPPAMDGRDVLGSAPTGTGKTAAFLL
PAIQHLLDFPRKKSGPPRVLILTPTRELAMQVADQAKELCAHNHLDVATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVEILILDEADRMLDMGFAHDIETIAGETRW
RKQTMLFSATLEGEAIRDFAERLLEDPIEIEADPSRRERKKIQQFYYRADTLEHKTALLC
HLIKQEDVTKSIVFVRKRERVREVVQWLREAGIEPCYIEGEMVQAKRNEAVRRLVTGQVK
VLVATDVASRGLDIENVSHVFNFDLPRTADVYLHRIGRTGRAGRKGTALSLVEAHDFPLL
GKITRYIEDPIKMRVVDSLRPTTKAPSEAMLNKPKPSKKVLAKRKEKKKEEQSKKKEKVR
HRDKKNIGKRRTPAISSTTAPSATADSNKTK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatccactttttctgaacttgagcttgatgaaagcctgatcaccgcgctgacc
aataaaggttacgagcgcccgacggccatccaagaagccgccatccctcctgcaatggat
ggacgcgacgttttaggttcagccccaaccggaacaggtaaaactgcggcattcttattg
ccagccattcaacatttacttgatttcccaagaaaaaaatcaggtccgcctcgcgttctg
attttaacaccaactcgcgaactcgctatgcaagtcgctgatcaagctaaagagttgtgt
gcacataatcatttagacgttgccaccattacaggcggcgttgcgtatatgaaccacgct
gaagttttcagcgaaaaccaagatatcgtcgtcgcaaccactgggcgtttgctgcaatac
attaaagaagaaaacttcgattgccgcgctgtggaaattctgatcctcgatgaagctgac
cgtatgctggacatgggctttgcgcacgatatcgaaacgatcgcaggcgaaacccgctgg
cgtaagcaaaccatgttgttctccgccacccttgaaggtgaagcgattcgtgattttgct
gagcgcttgcttgaagatcctatcgaaattgaagcggatccttcgcgccgtgaacgcaag
aaaatccaacaattctactatcgcgctgacacgttagaacataaaactgctttactgtgc
caccttatcaagcaagaagatgtcaccaaatcgattgtcttcgtgcgtaagcgtgaacgc
gttcgtgaagttgttcaatggctgcgtgaggctggtattgagccttgctatatcgaaggc
gaaatggtgcaagcgaagcgtaacgaagccgttcgccgcttagtgactgggcaagtgaaa
gtcctcgttgcgacagacgttgcttcccgtgggttagatattgaaaacgtcagtcatgtt
tttaatttcgacttaccacgcactgcagatgtctatttgcaccgtatcggccgtactggt
cgtgctggacgcaaaggtactgctctttctttagttgaagcacacgattttcctctactg
ggtaaaatcactcgctacatcgaagatccgattaagatgcgcgtggtagattcattacgc
ccaacaaccaaagcgccttctgaagcgatgctgaataagcccaaaccatctaagaaagtg
ctggctaagcgtaaagagaagaaaaaagaagagcaaagcaagaaaaaagaaaaagtacgc
catcgcgataagaaaaatatcggtaaacgtcgcactccagctatatcatctacaactgcg
ccatctgcaactgcagatagcaataaaaccaagtaa
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