Providencia zhijiangensis: QS795_013840
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Entry
QS795_013840 CDS
T09966
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pzj
Providencia zhijiangensis
Pathway
pzj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pzj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QS795_013840 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pzj03400
]
QS795_013840 (recD)
Enzymes [BR:
pzj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QS795_013840 (recD)
DNA repair and recombination proteins [BR:
pzj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QS795_013840 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
NAT10_TcmA_helicase
SH3_13
Viral_helicase1
AAA_11
UvrD-helicase
SLFN-g3_helicase
AAA_22
nSTAND3
DEAD
AAA_28
AAA_16
PhoH
MukB
NTPase_1
NACHT
UvrD_C
CbiA
SRP54
AAA
NPHP3_N
MeaB
Motif
Other DBs
NCBI-ProteinID:
WPA93910
UniProt:
A0ABZ0N653
LinkDB
All DBs
Position
complement(3030608..3032527)
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AA seq
639 aa
AA seq
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MKALFNQAIEARIFTPLDVQFAYNVANEDNSILLVVAALLSAETMSGHVCLSLEDIRPDV
LFMGRHPEFTAQLWQMIGEPNQAAIRAALLSSESVCEVEGGSVAPLLLSGDFLYFQRMWQ
YEQCVAHFFSETELADVRNDNIVNDSKIQPILTELFPESTQIDWQKIAAAIALTSRVSVI
SGGPGTGKTTTVAKILAALIKLGHQQQHRLRIELAAPTGKAAARLTESLGYAMKQLPLND
DERESLPSQAKTLHRLLGAQPESQQFRYHRDNPLALDILIVDEASMVDLPMMGKLIEALP
DSAKLIFLGDKDQLASVEAGAVLGDICRFANKGYSPERAAQLERLAGCSLSEFTSNKGPA
IRDSLCLLRHSYRFSADSGIGQLAFAVNAGNVKRVDDILTQGFTDIHNYIPNAMPDNEND
AEAEISESYANMLLDAVGFYQHYLLAVKARENPADVLHKFNQYRLLASLREGAYGVSGLN
DKLEKLLHRQGLITKPYNLQHKHYVGRPVMISRNDSALGLFNGDIGIILLDEERQMRAYF
QFPDGSIRGIQPNRLPTHETAYVMTVHKSQGSEFAHTALVLPYVYSPVITRELVYTAMTR
AKNELSLYGSKKVLRRAIETPTKRRSGLALQFEHYGLSS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgttatttaatcaagctattgaagcgcgtatattcacgcctcttgatgtgcaa
ttcgcctataacgttgcgaatgaagataactcgattttattggtagtggcagcgctgctt
agtgcagaaactatgtctggacatgtttgcttatcgttggaggatattcgccctgacgtg
ctatttatgggaagacatcctgagtttacggcgcaattatggcaaatgattggagaacca
aatcaagccgctatcagagctgcattattatccagtgaatccgtgtgtgaagttgaggga
gggtctgttgctccattgctgctatcaggtgatttcctttatttccagcgtatgtggcaa
tacgagcagtgcgtagctcacttcttttcagaaactgaattagccgatgttaggaatgat
aatattgttaatgattcgaaaattcagccgattttaacggagcttttccctgaatcaacg
cagatagattggcaaaaaattgccgctgctattgcgttaactagccgagtctcggttatt
tcagggggacctggaacggggaaaacgacgacggtcgcgaaaattttagcggcgctgatt
aagttaggccatcaacagcaacatcgtttgcgtattgaattagccgccccaacaggtaaa
gctgccgctcgtttaaccgagtcattagggtatgcgatgaaacagctgccgctaaatgac
gatgagcgtgaatcactcccctctcaagccaaaacattacaccgattattaggggctcag
cctgaaagccagcagtttcgttatcaccgtgataatccgctagcacttgatatcttgatt
gttgacgaagcttccatggtggatttacccatgatgggtaagctcattgaagcactgcct
gattcagctaaattgatatttttaggtgataaagatcagctcgcttctgttgaagcgggg
gcggttttaggggatatctgccgtttcgcgaataaaggctatagccctgagcgagccgct
cagctggagcgattggcaggatgctcattaagtgaatttacttcaaataaagggcctgct
atccgtgatagtttatgtctattaagacacagttatcgtttttctgcggattcaggaatt
ggccagttggctttcgccgtcaatgccggaaatgtgaaaagggtggatgatattcttacg
cagggtttcacggatattcataactatattcctaacgctatgccagataacgaaaacgat
gctgaagctgaaattagtgaaagctacgctaacatgttattagatgctgtagggttctat
cagcactatttactagccgttaaagcaagggaaaatcctgccgatgtcctacataaattt
aatcaataccgtctacttgcctcattgagggaaggggcttacggggtttctggtttaaat
gacaaacttgaaaaattactccatcgccaaggattaattacaaaaccgtataacttgcag
cataagcattatgttggaaggccggttatgatcagccgtaatgatagcgcactaggcctc
tttaatggcgatattggtattatcttgttagatgaagagcggcaaatgagagcttatttc
cagtttcctgatggctccattcgtgggatccaacccaatcgactgccaacacatgaaacg
gcttacgtgatgacggttcataaatctcaaggttcagagtttgctcataccgccttggtt
ctaccttatgtatattcgcccgtaatcactcgagagctcgtctataccgcgatgacacga
gctaaaaatgaactttcattgtatggcagcaaaaaagtgttacgccgtgcgatagaaaca
ccgactaaacgccgtagtggcttagcgctacagtttgaacactacggtttgagcagttaa
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