Providencia zhijiangensis: QS795_015775
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Entry
QS795_015775 CDS
T09966
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pzj
Providencia zhijiangensis
Pathway
pzj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pzj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QS795_015775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pzj03019
]
QS795_015775
03009 Ribosome biogenesis [BR:
pzj03009
]
QS795_015775
Enzymes [BR:
pzj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QS795_015775
Messenger RNA biogenesis [BR:
pzj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QS795_015775
Ribosome biogenesis [BR:
pzj03009
]
Prokaryotic type
rRNA helicases
QS795_015775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
DRTGG
Motif
Other DBs
NCBI-ProteinID:
WPA91905
LinkDB
All DBs
Position
complement(3453030..3454997)
Genome browser
AA seq
655 aa
AA seq
DB search
MTTETDMSFADLGLSASILNALSDLGYEKPSPIQQQCIPLLLDGNDVLGMAQTGSGKTAA
FGLPLLHNIDPDLKAPQILVLAPTRELAVQVAEALSDFSKHMNRVNVVALYGGQRYDVQL
RALRQGPQVVVGTPGRLLDHLKRGTLDLSKLKGLVLDEADEMLRMGFIDDVENIMSQIPA
EHQTALFSATMPEPIRRITRRFMKDPKEIRIQSSITTRPDIAQSYWTVYGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLRN
VERTMKLTIPEVELPDADVLSQRRQAKFAEQIQQQLESSDLDQYRSLLAKMSPSEDVDME
TLAAALLKMAQGERALILPPDAPRRPRREFNDRDDRRGDRRDRNSNGNGFDRAERGDRGA
RRERRDVGDMEMYRIEVGRDDGVEVRHIVGAIANEADISSRYIGNIKLFGTHSTIELPKG
MPSEVLTHLSRARVLNKPMQMQLIGDAQPFERRGGGERRGGPRREGGSEGGFGAGRRNDR
GGDRDGRRSGGDREGFSGNRRGGNRDGGNRDRGNSAPRQDGTNAAPRRRSSSHNA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgagaccgatatgtcttttgctgatctaggtttatcagcatctattttgaac
gcactaagcgacctgggatacgaaaaaccatctccaatccagcaacaatgtattccattg
ttattggatggtaatgatgtattaggtatggcacaaacaggtagtggtaaaaccgctgca
tttggtttgccattactgcataacatcgaccctgatttaaaagcgccacaaattttagta
ctggcaccgacacgtgagttagcggtgcaagttgctgaagcactgagcgatttctctaaa
cacatgaaccgtgtcaacgtggttgccttatatggcggtcaacgttatgacgttcaactt
cgtgcattacgccaaggaccacaagtggttgttggtactccaggtcgtctgttagaccac
ctgaagcgcggtactttagatctttctaaactgaaaggcttagtattagacgaagctgat
gaaatgctgcgtatgggcttcatcgatgatgttgaaaacatcatgagccagattccggca
gaacaccaaactgcgctgttctcggcaacaatgccagaaccaatccgtcgtattactcgt
cgctttatgaaagatcctaaagagatccgcattcagtcgagcattactacacgtccagat
atcgctcaaagctactggactgtttacggcatgcgtaaaaatgaagcgctggtacgtttc
ttagaagctgaagatttcgatgcggcgattattttcgttcgtaccaaaaacgcaacctta
gaagttgcagaagcgcttgagcgtaatggctacaacagtgcggcactgaatggtgacatg
aaccaagcactgcgtgaacaaacattagagcgcttaaaagatggtcgtttagatatcctg
atcgcaactgacgttgcagcacgtggtctggatgttgagcgtatcagcttagttgttaac
tacgacatcccaatggatgcggaatcttacgttcaccgtatcggtcgtaccggtcgtgcg
ggtcgtgcgggtcgtgcattactgttcgttgagaaccgtgagcgtcgtttactgcgcaac
gttgaacgtacaatgaaactgactattcctgaagtggaattgccagatgctgacgtatta
agccaacgtcgtcaggcgaaatttgctgaacaaattcaacagcaattagaaagtagcgac
ttagatcagtaccgttcactgttagcgaaaatgtctccatctgaagatgtagatatggaa
actttagcagcggcattactgaaaatggctcaaggcgaacgcgctctgatcctgccacca
gatgcaccgcgtcgtccgcgtcgtgaattcaacgaccgtgatgatcgtcgtggcgaccgt
cgtgaccgcaacagcaacggcaacggttttgaccgtgcagagcgcggcgaccgtggtgct
cgtcgtgagcgtcgtgatgttggcgatatggaaatgtaccgtatcgaagtgggtcgtgat
gacggtgttgaagttcgtcatatcgttggtgcgattgcgaacgaagcagacatcagcagc
cgctacattggtaatatcaaactgtttggtactcactcaactatcgagttaccaaaaggt
atgccaagcgaagtgttaactcacttaagccgtgcgcgtgtactgaacaaaccaatgcaa
atgcaactgatcggtgatgctcaaccatttgagcgtcgtggcggtggcgaacgtcgtggt
ggcccacgtcgtgaaggcggcagcgaaggtggtttcggtgcaggtcgtcgtaatgaccgt
ggtggcgatcgtgatggtcgtcgtagcggtggtgatcgcgaaggcttcagcggcaaccgt
cgtggtggaaaccgtgatggcggcaaccgtgaccgtggtaactctgcaccgcgccaagat
ggcaccaatgcagcaccacgtcgtcgtagcagcagccacaacgcatag
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