Providencia zhijiangensis: QS795_016390
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Entry
QS795_016390 CDS
T09966
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pzj
Providencia zhijiangensis
Pathway
pzj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pzj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QS795_016390 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pzj03019
]
QS795_016390 (rhlB)
Enzymes [BR:
pzj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QS795_016390 (rhlB)
Messenger RNA biogenesis [BR:
pzj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QS795_016390 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WPA92017
UniProt:
A0ABZ0N0W0
LinkDB
All DBs
Position
3580692..3581978
Genome browser
AA seq
428 aa
AA seq
DB search
MSKAHLTEKKFSDFALHPKVIEALNKKGFNFCTPIQASTLPYTVEGKDVAGQAQTGTGKT
LAFLTSTFHFLLTHPAIEGKKTNQPRALIMAPTRELAVQIYSDAKELAEYTGLKMGLAYG
GDGYDEQLRVLQNGVDILIGTTGRLIDYAKQGHVDLAAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPGATDRLNLLFSATLSYRVRELAFEQMNSPEYVEVEPLQKTGHRIKEELFYPSN
EEKMRLLQTLLEEEWPERCIIFANTKHRCDDIWAHLAADGHRVGLLTGDVAQKKRLRILE
QFTQGQIDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGESGNSISLA
CEEYALNLPAIEEYIQHSIPVSKYNSDALLSDLPAPKRRHRPRPSGPRRNSNAPRRHNGP
RNNHKRAG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcacacttgacagaaaagaagttttccgacttcgcattgcacccaaaagtc
attgaagcacttaataaaaaaggcttcaacttttgcacgcctattcaggcgtctaccctg
ccttatactgtcgaaggcaaagatgttgcggggcaagcacaaacaggtacaggtaaaacg
ttagcattcctaacgtctacatttcattttctcttaactcacccggcaatcgaggggaaa
aaaaccaatcagccacgtgcgctgatcatggctcctactcgtgaattagccgtacagatt
tactcagatgctaaagagctggctgagtacactggtttgaaaatgggtctagcctatggt
ggtgatggctatgacgagcagttacgcgtattacaaaacggcgttgatatccttattgga
acaaccggtcgtcttattgattatgcaaaacaaggtcacgttgatttagcggctatccaa
gttgttgttttggatgaagctgaccgtatgtacgacctcggttttattaaagatattcgt
tggttattccgccgtatgcctggcgcaacagaccgactcaacttactgttctcagcaaca
ctctcttaccgcgttagagaattagcgtttgaacaaatgaacagcccggaatatgtggaa
gttgaaccactacaaaaaaccggtcaccgtattaaagaagagctattttatccatccaac
gaagaaaaaatgcgcctactgcaaacgctactcgaagaagagtggccagagcgctgcatt
attttcgccaatacgaagcatcgttgtgatgatatctgggctcaccttgctgccgatggc
caccgtgtcgggttattaactggcgatgtcgcacagaaaaaacgtctgcgcattttagaa
cagttcacccaaggtcaaattgatatcttggttgcgactgacgttgctgctcgtggatta
catattccatcagtaactcatgtatttaactatgatttacctgacgattgcgaagactat
gtgcaccgtattggacgtacaggtcgtgcaggtgaaagcggaaattctatcagcttagca
tgtgaagaatacgcactaaacttacctgcaatcgaagagtatattcagcactccatccct
gtcagtaaatataacagtgatgcactgctgagcgacctgccggcaccaaaacgccgtcac
cgtccgcgccctagtggtccacgccgcaattctaatgcgccgcgtcgccataatggccca
cgtaataaccataaacgtgcaggctga
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