Providencia zhejiangensis: ACE2AM_02420
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Entry
ACE2AM_02420 CDS
T10958
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
pzn Providencia zhejiangensis
Brite
KEGG Orthology (KO) [BR:
pzn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pzn03016
]
ACE2AM_02420
Enzymes [BR:
pzn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ACE2AM_02420
Transfer RNA biogenesis [BR:
pzn03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ACE2AM_02420
Prokaryotic type
tRNA splicing ligases
ACE2AM_02420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
XGY78497
LinkDB
All DBs
Position
complement(563986..565212)
Genome browser
AA seq
408 aa
AA seq
DB search
MVSNHVNNIILENSAPVKMWTHGVPVDPKAITQLQNTAKMPFIFKHLAVMPDVHVGKGST
IGSVIPTKGAIIPAAVGVDIGCGMIAVRTSLTAADLPDNLQNIRFAIEAAVPHGRTTQRH
GRDKGAWHQVPQIVDQHWAHLDEEFKRLCDKYPKLRATNHYKHLGTLGTGNHFIELCLDE
QNRVWVMLHSGSRGVGNAIGNLFISLAQKDMQQHIANLPDRDLAYFKEGSQHFNDYMNAV
GWAQDFARHNREVMMHRVLEALSKEITKPFTTQQEAVNCHHNYVQKEQHFGEEILVTRKG
AVSAQKGQMGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRVMSRTEAKKRYSVTDQKIA
TAHVECRKDSDVIDEIPMAYKDIDAVMAAQSSLVEIVHTLRQVVCVKG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggttagtaatcatgtaaacaacatcattttggaaaacagtgcccctgtcaaaatgtgg
actcacggagtccccgttgacccaaaagcaatcacacaattacaaaacacggcgaaaatg
ccatttatctttaaacatttagctgtaatgccggatgtacatgttggaaaaggttcaact
atcggtagtgttatcccaacgaaaggggccattatccctgctgccgtgggtgtcgatatt
ggctgcggaatgatagcggtacgtacatcactaacggctgctgacctccccgataactta
cagaatattcgttttgccattgaagctgcggtaccacatgggcgaaccacccagcggcac
ggtcgtgataaaggtgcatggcatcaagttcctcagattgttgatcaacattgggcgcat
ctggatgaagaatttaaacgtttatgtgataagtaccccaaactacgcgcgactaaccat
tacaagcatttaggaacattgggaacgggtaatcactttattgagctgtgtttggatgaa
caaaatcgcgtgtgggtgatgttacatagcggatcgcgtggagtgggtaatgcgattggt
aacctgtttatctctttagcgcaaaaagatatgcagcaacatattgccaatctaccagat
cgtgacttggcttattttaaggaaggcagtcaacactttaatgattacatgaacgctgtg
ggttgggcacaagatttcgctcgtcataaccgcgaagtgatgatgcaccgcgtattagaa
gctctttcaaaagaaattacgaagccttttacgacacagcaagaagccgttaactgccac
cataactatgtgcagaaagaacaacattttggtgaagaaattctggttacacgcaaaggc
gcagtgtccgcacaaaaggggcaaatggggattattcctggatcaatgggagcgaaaagc
ttcattgtacgtggattaggtaatgaagaaagtttctgttcttgtagccacggtgctggc
cgtgtgatgagtcgcactgaagccaaaaagcgttactccgtgactgaccaaaaaatagca
actgcccatgttgaatgtcgaaaagatagtgatgtgattgatgaaattcctatggcatac
aaggatattgatgctgtgatggcagcgcaatcctcattagtagaaatcgtacatacacta
cgccaagttgtgtgtgttaaaggatag
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